CN184932

Overview
NameCN184932
Unique NameCN184932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CRK_DAUCA (CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.216e-46
Identity = 91/136 (66.91%), Postives = 110/136 (80.88%), Query Frame = 3
Query:  402 KHIKASLAKRLGGGKPKESTIPEERGTEPEQSLDKSFGYNKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KHIKA+ A+R G  KP E+ IPE    +    LDKSFG++K FG+K+E+G+EVGRGHFG+TC A+ KKGE K Q VAVK+I KAKMTTAI+IEDVRREVKIL+AL+GH +LV+F DA ED  NVY+VMELCEGGEL
Sbjct:  102 KHIKAAWARRHGSVKPNEAAIPENNEVDGGAGLDKSFGFSKKFGSKFEVGEEVGRGHFGYTCRAKFKKGEFKGQDVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHNNLVQFYDAFEDHTNVYVVMELCEGGEL 237          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CAMK1_ORYSJ (Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.911e-45
Identity = 91/136 (66.91%), Postives = 111/136 (81.62%), Query Frame = 3
Query:  402 KHIKASLAKRLGGGKPKESTIPEERGTEPEQSLDKSFGYNKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KHI+A LA+R G  KP E++IPE    EP  +LDK FG++++F AKYELG+EVGRGHFG+TC+A  KKGELK   VAVK+I KAKMTTAI+IEDVRREV+IL +L+GH +LV+F DA ED  NVYIVMELC+GGEL
Sbjct:  103 KHIRALLARRHGSVKPNEASIPESG--EPGVALDKGFGFSRHFAAKYELGREVGRGHFGYTCAATCKKGELKGDDVAVKVIPKAKMTTAIAIEDVRREVRILSSLAGHSNLVQFYDAYEDEENVYIVMELCKGGEL 236          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKG_ARATH (Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana GN=CPK16 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.667e-25
Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 3
Query:  510 FGYNKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            FGY K+F  +Y +GK +G G FG+T  A  KK      +VAVK I KAKMT  I++EDV+REVKIL+AL+GH+++V+F +A ED N+VYIVMELCEGGEL
Sbjct:   98 FGYAKDFDHRYTIGKLLGHGQFGYTYVATDKK---TGDRVAVKKIDKAKMTIPIAVEDVKREVKILQALTGHENVVRFYNAFEDKNSVYIVMELCEGGEL 194          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKI_ARATH (Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.938e-21
Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 3
Query:  510 FGYNKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            FGY K+F  +Y +GK +G G FG T  A          +VAVK I KAKMT  I +EDV+REVKIL+AL GH+++V F +A ED   +YIVMELC+GGEL
Sbjct:   61 FGYAKDFDNRYTIGKLLGHGQFGFTYVATDNNN---GNRVAVKRIDKAKMTQPIEVEDVKREVKILQALGGHENVVGFHNAFEDKTYIYIVMELCDGGEL 157          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKS_ARATH (Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.954e-20
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 3
Query:  510 FGYNKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            FGY+K+F   Y +GK +G G FG+T  A  +       +VAVK + K+KM   I++EDV+REV+IL ALSGH+++V+F +A ED + VYIVMELCEGGEL
Sbjct:   52 FGYSKDFHDHYTIGKLLGHGQFGYTYVAIHRPN---GDRVAVKRLDKSKMVLPIAVEDVKREVQILIALSGHENVVQFHNAFEDDDYVYIVMELCEGGEL 148          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.450e-17
Identity = 47/93 (50.54%), Postives = 63/93 (67.74%), Query Frame = 3
Query:  537 KYELGKEVGRGHFG--HTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KY+LGKE+GRG FG  H C     +     ++ A K ISK K+ T I +EDVRREV+I++ L  H ++V F +A ED + VY+VME+CEGGEL
Sbjct:   65 KYDLGKELGRGEFGVTHECIEISTR-----ERFACKRISKEKLRTEIDVEDVRREVEIMRCLPKHPNIVSFKEAFEDKDAVYLVMEICEGGEL 152          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.685e-17
Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = 3
Query:  537 KYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            +Y+LG+EVGRG FG T     K+     ++ A K ISK K+ TA+ IEDVRREV+I+K +  H ++V   D+ ED + V+IVMELCEGGEL
Sbjct:   58 QYDLGREVGRGEFGITYLCTDKE---TGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPKHPNVVSLKDSFEDDDAVHIVMELCEGGEL 145          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.004e-16
Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = 3
Query:  540 YELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            Y+LG+EVGRG FG T      K     ++ A K ISK K+ TA+ IEDVRREV+I+K +  H ++V   DA ED + V+IVMELCEGGEL
Sbjct:   57 YDLGREVGRGEFGITYLCTDIK---TGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPRHPNIVSLKDAFEDDDAVHIVMELCEGGEL 143          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 3
Query:  537 KYELGKEVGRGHFGHT--CSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KY LG+E+GRG FG T  C+ R  +     + +A K ISK K+ TA+ +EDVRREV I+  L  H ++VK     ED  NV++VMELCEGGEL
Sbjct:   58 KYILGRELGRGEFGITYLCTDRETR-----EALACKSISKRKLRTAVDVEDVRREVTIMSTLPEHPNVVKLKATYEDNENVHLVMELCEGGEL 145          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 3
Query:  537 KYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KY LG+E+GRG FG T     ++     + +A K ISK K+ TA+ IEDVRREV I+  L  H ++VK   + ED  NV++VMELCEGGEL
Sbjct:   62 KYILGRELGRGEFGITYLCTDRETH---EALACKSISKRKLRTAVDIEDVRREVAIMSTLPEHPNVVKLKASYEDNENVHLVMELCEGGEL 149          
The following BLAST results are available for this feature:
BLAST of CN184932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CRK_DAUCA1.216e-4666.91CDPK-related protein kinase OS=Daucus carota GN=CR... [more]
CAMK1_ORYSJ3.911e-4566.91Calcium/calmodulin-dependent serine/threonine-prot... [more]
CDPKG_ARATH7.667e-2559.00Calcium-dependent protein kinase 16 OS=Arabidopsis... [more]
CDPKI_ARATH3.938e-2154.00Calcium-dependent protein kinase 18 OS=Arabidopsis... [more]
CDPKS_ARATH1.954e-2053.00Calcium-dependent protein kinase 28 OS=Arabidopsis... [more]
CDPKO_ARATH3.450e-1750.54Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPK7_ARATH7.685e-1751.65Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
CDPK8_ARATH1.004e-1653.33Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPKU_ARATH6.506e-1650.54Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPKA_ARATH6.506e-1650.55Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184932 ID=CN184932; Name=CN184932; organism=Citrus sinensis; type=EST; length=810bp
GAGGATCAGATCCGTGTTGGAGATTTTGTACCGTCCGATGTGTGGACTTT
GATTGAGTCTCGATCGGACGAGAAGCCGGTGCTGGATTCCTTACGATGGG
GCAGTGTTACGGTAAGACCATCCCAACAACTGAAAATGACGCCACAACGA
GCGCAACCACAACGACTATGGTCGTATCCGCCAATCAAAATCAAACGCCG
TTACCGCCGTCAACTCCAGGTAACGGTTCCATGCCGGTGAAGAATACCCC
GGGACGGTCCTCTCACCCGAGCCCCTGGCCGAGTCCTTATCCTCACGGCG
TTTCGGCCAGTCCACTGCCTGCCGGCGTCTCTCCGTCTCCGGCTAGAGCG
TCGACGCCGAGGAGATTTTTTAGAAGGCCGTTCCCTCCGCCATCTCCGGC
GAAACACATTAAGGCGTCTTTAGCTAAGCGACTTGGCGGTGGGAAGCCAA
AAGAAAGTACGATTCCCGAAGAGCGAGGAACCGAACCGGAGCAGTCGCTC
GACAAGAGCTTCGGGTACAACAAGAATTTTGGGGCTAAGTATGAGCTTGG
AAAGGAAGTAGGGCGAGGCCATTTTGGTCATACTTGCTCTGCTAGAGGTA
AAAAGGGTGAGCTCAAGGATCAGCAAGTTGCTGTCAAGATAATATCTAAA
GCCAAGATGACGACAGCAATATCAATTGAGGATGTGCGGAGGGAGGTGAA
AATATTGAAAGCATTGTCAGGACATAAGCATCTAGTCAAATTCTGTGATG
CTTGTGAGGATGTGAACAATGTGTACATAGTCATGGAATTGTGTGAGGGT
GGAGAACTTC
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