CN184927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184927 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 2.676e-51 Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = -3 Query: 166 AKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 468 AKVVVLDIRFP LPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD+SSMGQ VEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV Sbjct: 246 AKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346
BLAST of CN184927 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 7.287e-49 Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = -3 Query: 166 AKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 468 AK+VVLDIRFP LPVVELQRHQASVNAIAWAPHSS HIC+AGDDSQALIWD+SSMGQ VEGGLDPILAYTAGAE+EQLQWSSSQPDWVAIAFS KLQILRV Sbjct: 246 AKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346
BLAST of CN184927 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.022e-34 Identity = 67/100 (67.00%), Postives = 83/100 (83.00%), Query Frame = -3 Query: 166 KVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 465 KVV+LDIR PT+PV EL+RHQASVNAIAWAP S HIC+ GDD+QALIW+L ++ P G+DP+ Y+AG+EI QLQWSSSQPDW+ IAF+ K+Q+LRV Sbjct: 244 KVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP--NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341
BLAST of CN184927 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 2.276e-34 Identity = 67/100 (67.00%), Postives = 81/100 (81.00%), Query Frame = -3 Query: 166 KVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 465 KV++LDIR P++P EL H+++VN I+WAPHSSCHICT DD QALIWDLSSM +P+E DP+L Y A AEI QL WSSSQPDW+AIAFS+ LQIL+V Sbjct: 229 KVIILDIRVPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE---DPLLTYNALAEINQLSWSSSQPDWIAIAFSSHLQILKV 325
BLAST of CN184927 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.017e-31 Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = -3 Query: 166 KVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 465 +VV+LD+R P PV L H+A VN IAWAPHSSCHICTA DD QALIWD+ M + +E DPILAYTA EI +QW+S+QPDW+AI ++ L+ILRV Sbjct: 246 EVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
BLAST of CN184927 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.017e-31 Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = -3 Query: 166 KVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 465 +VV+LD+R P PV L H+A VN IAWAPHSSCHICTA DD QALIWD+ M + +E DPILAYTA EI +QW+S+QPDW+AI ++ L+ILRV Sbjct: 246 EVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342 The following BLAST results are available for this feature:
BLAST of CN184927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184927 ID=CN184927; Name=CN184927; organism=Citrus sinensis; type=EST; length=470bpback to top |