EY666473

Overview
NameEY666473
Unique NameEY666473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY666473 vs. ExPASy Swiss-Prot
Match: NOTUM_MOUSE (Protein notum homolog OS=Mus musculus GN=Notum PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.260e-14
Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = 2 
Query:  218 CLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKT--RLGSSKQMVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSPGG 625
            C DGSP  Y+  +  G+    WL+ +EGG +C N   C  R  T  RL SSK        +G+LS++ + NP ++N N + + YC    ++G     +  N   F G+ + Q V+ +L+ KG+  A+  +L+G S GG
Sbjct:  108 CNDGSPAGYYLKESKGS--RRWLLFLEGGWYCFNRENCDSRYSTMRRLMSSKDWPHTRTGTGILSSQPEENPHWWNANMVFIPYCSSDVWSG-ASPKSDKNEYAFMGSLIIQEVVRELLGKGLSGAKVLLLAGSSAGG 242
[Close]
BLAST of EY666473 vs. ExPASy Swiss-Prot
Match: NOTUM_HUMAN (Protein notum homolog OS=Homo sapiens GN=NOTUM PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14
Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 2 
Query:  218 CLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKT--RLGSSKQMVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSPGG 625
            C DGSP  Y+  +  G+    WL+ +EGG +C N   C  R  T  RL SS+   +    +G+LS++ + NP ++N N + + YC    ++G   + +  N   F GA + Q V+ +L+ +G+  A+  +L+G S GG
Sbjct:  101 CNDGSPAGYYLKESRGS--RRWLLFLEGGWYCFNRENCDSRYDTMRRLMSSRDWPRTRTGTGILSSQPEENPYWWNANMVFIPYCSSDVWSG-ASSKSEKNEYAFMGALIIQEVVRELLGRGLSGAKVLLLAGSSAGG 235
The following BLAST results are available for this feature:
BLAST of EY666473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NOTUM_MOUSE2.260e-1433.33Protein notum homolog OS=Mus musculus GN=Notum PE=... [more]
NOTUM_HUMAN2.952e-1432.61Protein notum homolog OS=Homo sapiens GN=NOTUM PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666473 ID=EY666473; Name=EY666473; organism=Citrus sinensis; type=EST; length=850bp
CGGACGCGTGGGTCCCAATGCACTAACCTGGGCTCCTTTTGCAAACTCTT
TAAACTAGTCCCATTTGCAATTGTTTTTTTTGCCTCATTTCAGAATGGTT
GCTGCAAGAATGGGCCAATGGTTGAATCTTTTAGTATGTGCACTCATATT
ACTGAAAGCTGACGGCTTTAATGTAGGAATCACATATGTTGAGAATGCTG
TAGTGAAAGGAGCTGTTTGTTTGGATGGTAGCCCGCCTGCTTACCATTTT
GATAAGGGGTTTGGTGCTGGGATCAATAATTGGTTGGTTCACATTGAGGG
AGGAGGATGGTGCAACAATGTCACAACTTGTCTTGAACGTAAGAAAACCC
GTTTAGGTTCATCTAAGCAAATGGTCAAGGTAGTTGCATTCTCTGGGATG
CTGAGCAACAAGCAAAAATTTAACCCAGACTTCTACAATTGGAATAGAAT
CAAGGTTAGATACTGTGATGGGGCATCGTTTACTGGAGATGTGGAGGCTG
TCAATCCAGCAAATAACCTTCACTTCAGAGGAGCAAGGGTTTTTCAAGCT
GTCATGGAGGATCTAATGGCTAAAGGGATGAAAAATGCTCAAAATGCTGT
TCTTTCTGGCTGCTCACCTGGGGGGATTGACTTCCATTTTGCATTGTGAT
AACTTCCAAGCTCTCTTCCCTGGGGGGACTAAAGAAAAATGCTTTGCAAA
TGCTGGTTATTTTATCAACCCAAAAGGAGGTTCTGGGAACAAATCCCTTT
GAACCATTTTATGCCTCAGTGGGCCCAAACCCTGGGATCACCTTAAACAT
TTTCCCACCATCCTTGCCTTTCAAAAATTGGACCCCCGAACTTGGGTTTT
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