EY666466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.291e-55 Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 3 Query: 3 IEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 329 IEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDPWHNTIVQTL GN Sbjct: 144 IEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.291e-55 Identity = 100/107 (93.46%), Postives = 103/107 (96.26%), Query Frame = 3 Query: 3 IEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 323 IEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQT + Sbjct: 145 IEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.431e-46 Identity = 86/101 (85.15%), Postives = 93/101 (92.08%), Query Frame = 3 Query: 24 YVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 326 YVEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP E KEKELANGRLAMLAFLGF+VQHNV GKGPFENL QH++DPWHNTI+QT+SG Sbjct: 131 YVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAPL-ENKEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.220e-21 Identity = 55/113 (48.67%), Postives = 67/113 (59.29%), Query Frame = 3 Query: 3 IEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 323 IE +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 156 IELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.593e-21 Identity = 54/113 (47.79%), Postives = 67/113 (59.29%), Query Frame = 3 Query: 3 IEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 323 +E +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 156 VELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.044e-17 Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 3 IEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------PNEVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTL 320 +E L + E RR+QD PGS+ KQY L + YPGG +FNPL F + E K KE+ NGRLAMLA LG+ +Q VTG GP++NLL H++DP +N ++ +L Sbjct: 158 LEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSL 270
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.631e-16 Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 3 IEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------PNEVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTL 320 +E L + E RR+QD PGS+ KQY L YPGG FNPL F + E K KE+ NGRLAMLA LG+ +Q VTG GP++NLL H++DP +N ++ +L Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSL 272
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14 Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 3 Query: 108 PNEVGYPGGIFNPLNF----APTDEAKEKELANGRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 308 P + YPGG F+PL F A +E K KE+ NGRLAMLAF+GF VQ + G GP ENL H++DPWHN I Sbjct: 162 PEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.645e-13 Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 3 IEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF----APTDEAKEKELANGRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 308 IEF+ +VE +R S+ +D K+Y PGG F+PL + A +E K KE+ NGRLA+LA +GF VQ + G GP ENL H++DPWHN I Sbjct: 145 IEFLAIAFVEHQR--------SMEKDSEKKKY---------PGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234
BLAST of EY666466 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 3 Query: 123 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 326 +PGG F+PL A E K KE+ NGRLAM A LGF +Q VTG+GP ENL +H+SDP+ N ++ ++G Sbjct: 201 HPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAG 272 The following BLAST results are available for this feature:
BLAST of EY666466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666466 ID=EY666466; Name=EY666466; organism=Citrus sinensis; type=EST; length=576bpback to top |