DC887526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUM2_ARATH (Fumarate hydratase 2, chloroplastic OS=Arabidopsis thaliana GN=FUM2 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.545e-57 Identity = 109/124 (87.90%), Postives = 118/124 (95.16%), Query Frame = -3 Query: 322 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPSD 693 +GNHVA+T+GGSNGHFELNVFKP+IAS LLHS+RL+ DASASFEKNCVRGI+ANRERISKLLHESLMLVTSLNPKIGYDNAAAVAK+AHKEG TLK AA+KLGVL SEEFD LVVPEKMIGPSD Sbjct: 376 MGNHVAVTIGGSNGHFELNVFKPVIASALLHSIRLIADASASFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKRAHKEGCTLKHAAMKLGVLTSEEFDTLVVPEKMIGPSD 499
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUM1_ARATH (Fumarate hydratase 1, mitochondrial OS=Arabidopsis thaliana GN=FUM1 PE=1 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.545e-57 Identity = 110/124 (88.71%), Postives = 118/124 (95.16%), Query Frame = -3 Query: 322 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPSD 693 +GNHVA+TVGGSNGHFELNVFKP+IAS LLHS+RL+ DASASFEKNCVRGI+ANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEG TLK+AAL LGVL +EEFD LVVPEKMIGPSD Sbjct: 369 MGNHVAVTVGGSNGHFELNVFKPVIASALLHSVRLIADASASFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGCTLKEAALNLGVLTAEEFDTLVVPEKMIGPSD 492
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_MOUSE (Fumarate hydratase, mitochondrial OS=Mus musculus GN=Fh PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 9.721e-44 Identity = 84/122 (68.85%), Postives = 102/122 (83.61%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GNHVA+TVGGSNGHFELNVFKPM+ +LHS RLLGDAS SF +NCV GIQAN ERI+KL++ESLMLVT+LNP IGYD AA +AK AHK G+TLK+ A++LG L +E+FD V P+ M+GP Sbjct: 385 MGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGP 506
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_MACFA (Fumarate hydratase, mitochondrial OS=Macaca fascicularis GN=FH PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.721e-44 Identity = 84/122 (68.85%), Postives = 102/122 (83.61%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GNHVA+TVGGSNGHFELNVFKPM+ +LHS RLLGDAS SF +NCV GIQAN ERI+KL++ESLMLVT+LNP IGYD AA +AK AHK G+TLK+ A++LG L +E+FD V P+ M+GP Sbjct: 388 MGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGP 509
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_HUMAN (Fumarate hydratase, mitochondrial OS=Homo sapiens GN=FH PE=1 SV=3) HSP 1 Score: 176.792 bits (447), Expect = 9.721e-44 Identity = 84/122 (68.85%), Postives = 102/122 (83.61%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GNHVA+TVGGSNGHFELNVFKPM+ +LHS RLLGDAS SF +NCV GIQAN ERI+KL++ESLMLVT+LNP IGYD AA +AK AHK G+TLK+ A++LG L +E+FD V P+ M+GP Sbjct: 388 MGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGP 509
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_DANRE (Fumarate hydratase, mitochondrial OS=Danio rerio GN=fh PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.658e-43 Identity = 85/122 (69.67%), Postives = 101/122 (82.79%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GNHVA+TVGGSNGHFELNVFKPMI +L+S RLLGDAS SF NCV GI+AN ERI+KL+ ESLMLVT+LNP IGYD AA +AK AHK+G+TLK+AALKLG LN ++F+ V P M+GP Sbjct: 387 MGNHVAVTVGGSNGHFELNVFKPMIIKNVLNSARLLGDASVSFTNNCVVGIEANTERINKLMSESLMLVTALNPHIGYDKAAKIAKTAHKDGSTLKEAALKLGFLNEQQFEEWVRPHDMLGP 508
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_RAT (Fumarate hydratase, mitochondrial OS=Rattus norvegicus GN=Fh PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.166e-43 Identity = 84/122 (68.85%), Postives = 101/122 (82.79%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GNHVA+TVGGSNGHFELNVFKPM+ +LHS RLLGDAS SF +NCV GIQAN ERI+KL++ESLMLVT+LNP IGYD AA +AK AHK G+TLK A++LG L +E+FD V P+ M+GP Sbjct: 385 MGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKKTAIELGYLTAEQFDEWVKPKDMLGP 506
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_PIG (Fumarate hydratase, mitochondrial OS=Sus scrofa GN=FH PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.075e-42 Identity = 83/122 (68.03%), Postives = 100/122 (81.97%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GNHVA+TVGGSNGHFELNVFKPM+ +LHS RLLGDA+ SF +NCV GIQAN ERI+KL++ESLMLVT+LNP IGYD AA +AK AHK G+TLK A++LG L +E+FD V P M+GP Sbjct: 344 MGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDAAVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKATAVELGYLTAEQFDEWVKPRDMLGP 465
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_RHIOR (Fumarate hydratase, mitochondrial OS=Rhizopus oryzae GN=FUMR PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39 Identity = 81/124 (65.32%), Postives = 97/124 (78.23%), Query Frame = -3 Query: 322 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPSD 693 +GN+ AI+V GSNG FELNVFKP++ L+ S+RL+ DAS SF KNCV GI+AN ++IS +++ESLMLVT+LNP IGYD AA AKKAHKEGTTLK+AAL LG L SEEFD V PE MI D Sbjct: 371 MGNNTAISVAGSNGQFELNVFKPVMIKNLIQSIRLISDASISFTKNCVVGIEANEKKISSIMNESLMLVTALNPHIGYDKAAKCAKKAHKEGTTLKEAALSLGYLTSEEFDQWVRPEDMISAKD 494
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC1_BRAJA (Fumarate hydratase class II 1 OS=Bradyrhizobium japonicum GN=fumC1 PE=3 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 7.209e-39 Identity = 77/121 (63.64%), Postives = 97/121 (80.17%), Query Frame = -3 Query: 328 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 690 GNH AITV GS GHFELNV+KP++A +LHS+RL+ DA+ SF ++CV GI+A+ +RIS+L+ SLMLVT+L PKIGYDNAA VAK AH GTTLK+ AL+LG + ++EFD LV PEKM P Sbjct: 352 GNHTAITVAGSQGHFELNVYKPVLAYNMLHSIRLMADAARSFTEHCVSGIRADEKRISELMQRSLMLVTALAPKIGYDNAAKVAKTAHANGTTLKEEALRLGFVTADEFDRLVQPEKMTKP 472 The following BLAST results are available for this feature:
BLAST of DC887526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887526 ID=DC887526; Name=DC887526; organism=Citrus sinensis; type=EST; length=695bpback to top |