CN184827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1) HSP 1 Score: 426.017 bits (1094), Expect = 1.260e-118 Identity = 203/226 (89.82%), Postives = 219/226 (96.90%), Query Frame = -1 Query: 159 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKWGGKPDVL+ACVGGGSNAMGLFHEFVND +VR+IGVEAAGFGLDSGKHAATL+KG+VGVLHGA+SYLLQ++DGQIIEPHSISAGLDYPGVGPEHSF KD GRAEYY++TD+EALEAFKR SRLEGIIPALET+HALAYLEKLCPTL+DGT+VV+NFSGRGDKDVQT KYL V Sbjct: 245 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKYLDV 470
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 PE=2 SV=2) HSP 1 Score: 423.32 bits (1087), Expect = 8.168e-118 Identity = 202/226 (89.38%), Postives = 221/226 (97.79%), Query Frame = -1 Query: 159 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QA+EKWGGKPDVL+ACVGGGSNAMGLFHEFV+D +VR+IGVEAAGFGLDSGKHAATL+KG+VGVLHGA+SYLLQ++DGQIIEPHSISAGLDYPGVGPEHSFLKD GRAEY++VTD+EALEAFKR SRLEGIIPALET+HALA+LEKLCPTL DG +VV+NFSGRGDKDVQTAIKYL+V Sbjct: 250 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKYLEV 475
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB PE=2 SV=1) HSP 1 Score: 419.468 bits (1077), Expect = 1.179e-116 Identity = 203/226 (89.82%), Postives = 219/226 (96.90%), Query Frame = -1 Query: 159 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 836 KDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIGKETR+QALEKWGGKPDVL+ACVGGGSNAMGLFHEFV+DKDVR+IGVEAAGFGLDSGKHAATL+KGEVGVLHGA+SYLLQ++DGQIIEPHSISAGLDYPGVGPEHSFLKD GRAEYY TD+EALEAFKR SRLEGIIPALET+HALA+LEKLCPTL +GTKVV+N SGRGDKDV TAIK+LQV Sbjct: 241 KDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSRLEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQV 466
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 PE=2 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 5.128e-112 Identity = 193/226 (85.40%), Postives = 213/226 (94.25%), Query Frame = -1 Query: 159 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+FH VIGKETRRQA++KWGGKPDVL+ACVGGGSNAMGLFHEFV D+DVRL+G+EAAG G+D+ KHAATL+KG+VGVLHG++SYLLQ++DGQ+IEPHSISAGLDYPGVGPEHSFLKD GRAEY +VTD EAL+AFKR SRLEGIIPALET+HALAYLEKLCPTLADG +VVVN SGRGDKDV TA KYL V Sbjct: 218 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMDKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLVGLEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPTLADGVRVVVNCSGRGDKDVHTASKYLDV 443
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 2.545e-111 Identity = 193/226 (85.40%), Postives = 211/226 (93.36%), Query Frame = -1 Query: 159 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+FH VIGKETRRQA+ KWGGKPDVL+ACVGGGSNAMGLFHEFV D+DVRLIGVEAAG G+D+ KHAATL+KG+VGVLHG++SYLLQ++DGQ+IEPHSISAGLDYPGVGPEHSFLKD GRAEY +VTD EAL+AFKR SRLEGIIPALET+HALAYLEKLCPTL DG +VV+N SGRGDKDV TA KYL V Sbjct: 164 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLIGVEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPTLPDGVRVVLNCSGRGDKDVHTASKYLDV 389
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB2_ANASP (Tryptophan synthase beta chain 2 OS=Anabaena sp. (strain PCC 7120) GN=trpB2 PE=3 SV=1) HSP 1 Score: 379.407 bits (973), Expect = 1.353e-104 Identity = 181/224 (80.80%), Postives = 204/224 (91.07%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIG+ETR QALEKWGG PD+L+ACVGGGSNAMGLF+EFVN+ ++LIGVEAAG G+++ KHAATL+KG VGVLHGA+SYLLQ+EDGQ+IE HSISAGLDYPGVGPEHS+LKD GRAEYY+VTD+EAL AF+R SRLEGIIPALETAHA+AYLE LCP L ++V+N SGRGDKDVQT K+L Sbjct: 187 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIKLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEEALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIVINCSGRGDKDVQTVAKFL 410
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_ANAVT (Tryptophan synthase beta chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpB PE=3 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 1.767e-104 Identity = 180/224 (80.36%), Postives = 204/224 (91.07%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIG+ETR QALEKWGG PD+L+ACVGGGSNAMGLF+EFVN+ +RLIGVEAAG G+++ KHAATL+KG VGVLHGA+SYLLQ+EDGQ+IE HSISAGLDYPGVGPEHS+LKD GRAEYY+VTD++AL AF+R SRLEGIIPALETAHA+AYLE LCP L ++++N SGRGDKDVQT K+L Sbjct: 187 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIRLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEQALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIIINCSGRGDKDVQTVAKFL 410
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_TRIEI (Tryptophan synthase beta chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpB PE=3 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 1.145e-103 Identity = 180/225 (80.00%), Postives = 201/225 (89.33%), Query Frame = -1 Query: 162 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIG ETR Q LEKW G PD+L+ACVGGGSNAMGLFHEF+ND VR+IGVEAAG G+D+ KHAATL+ G VGVLHGA+SYLLQ+E+GQIIEPHSISAGLDYPGVGPEHSFLKD GR EYY+VTD+EA+ AF+R S+LEGIIPALETAHA+AYLE LCP L+ ++V N SGRGDKDVQT K+L+ Sbjct: 184 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGVETRAQCLEKWNGLPDILMACVGGGSNAMGLFHEFINDPSVRMIGVEAAGKGVDTNKHAATLTLGRVGVLHGAMSYLLQDEEGQIIEPHSISAGLDYPGVGPEHSFLKDSGRVEYYSVTDNEAVAAFQRLSQLEGIIPALETAHAIAYLETLCPQLSGSPRIVFNCSGRGDKDVQTVGKFLE 408
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_THEEB (Tryptophan synthase beta chain OS=Thermosynechococcus elongatus (strain BP-1) GN=trpB PE=3 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 9.073e-101 Identity = 175/225 (77.78%), Postives = 199/225 (88.44%), Query Frame = -1 Query: 162 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VR+FHAVIG ETR+Q LEKWGG PD+L+ACVGGGSNAMGLFHEFV + VRLIGVEAAG GLD+G HAATL+KGEVGVLHGA+SYLLQ+ DGQ++E HSISAGLDYPGVGPEHS+LKD GRAEYY+VTD EA+ A R ++LEGI+PALETAHALAYLE LCP L ++V+N SGRGDKDV+T +Y + Sbjct: 184 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVREFHAVIGAETRQQCLEKWGGLPDILLACVGGGSNAMGLFHEFVEEPQVRLIGVEAAGQGLDTGHHAATLTKGEVGVLHGAMSYLLQDADGQVVEAHSISAGLDYPGVGPEHSYLKDIGRAEYYSVTDTEAVAACVRLAQLEGILPALETAHALAYLETLCPQLTGQPRIVINCSGRGDKDVETIGRYFE 408
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_SYNY3 (Tryptophan synthase beta chain OS=Synechocystis sp. (strain PCC 6803) GN=trpB PE=3 SV=1) HSP 1 Score: 366.311 bits (939), Expect = 1.185e-100 Identity = 173/226 (76.55%), Postives = 202/226 (89.38%), Query Frame = -1 Query: 159 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFH VIG+ETR+QAL+KWGG PD+L+ACVGGGSNAMGLF++F+++ VRLIG+EAAG + SGKHAATL+ G+ GVLHGA+SYLLQ+++GQ+ E HSISAGLDYPGVGPEHS+LKD GRAEYY+VTD EA+ A +R S+LEGIIPALETAHA AYLE LCP L +G ++V+N SGRGDKDVQT KYLQ+ Sbjct: 185 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHRVIGQETRQQALKKWGGLPDILLACVGGGSNAMGLFYDFIDEPAVRLIGIEAAGESIVSGKHAATLTMGKPGVLHGAMSYLLQDKEGQVTEAHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDQEAITALQRLSQLEGIIPALETAHAFAYLETLCPQLKNGERIVINCSGRGDKDVQTVAKYLQM 410 The following BLAST results are available for this feature:
BLAST of CN184827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 451
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184827 ID=CN184827; Name=CN184827; organism=Citrus sinensis; type=EST; length=836bpback to top |