CN184825

Overview
NameCN184825
Unique NameCN184825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length382
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.356e-18
Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHIT 275
            Y NNI  TIP +LGNL  L+SLDLY +++S  IP +L  LK L FLRLN++ L+G+IP  L  + +L V+D+S+N L G IP +  F   T
Sbjct:  100 YSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFT 190          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.425e-17
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHITLNDFEKN 296
            Y NNI   IP  LGNL +L+SLDLY +  S  IP SL  L  L FLRLN++ LTG IP  L  I++L V+D+S+N L G++P +  F   T   F  N
Sbjct:  101 YSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 198          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.207e-16
Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHITLNDFEKN 296
            Y NNI   +P +LGNL +L+SLDLY +  +  IP SL  L  L FLRLN++ LTG IP  L  I +L V+D+S+N L G++P +  F   T   F  N
Sbjct:  104 YSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 201          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.688e-16
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHITLNDFEKNPRLERPQ 317
            Y NNI   IP ELG+L  L+SLDLY + +S  IP SL  L  L FLRLN++ L+G+IP  L  +  L V+D+S+N L G IP +  F   T   F  N   + P+
Sbjct:  107 YSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSV-QLQVLDISNNRLSGDIPVNGSFSLFTPISFANNSLTDLPE 210          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.972e-15
Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHITLNDFEKNPRLERP 314
            + NNI   IP ELG+L  L+SLDL+ +++S  IP SL  L  L FLRL ++ L+G+IP  L  +  L V+D+S+N L G IP +  F   T   F  N    RP
Sbjct:  102 FNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVNGSFSQFTSMSFANNKLRPRP 204          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.130e-13
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:    6 KNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHITLNDFEKNPRL 305
            +NN+  TIPVE+G L  L  L+L  ++ S  IP  L+NL +L  L L+++ L+G+IP  L G+  L+  +V++N L G IPT   F+     +FE NP L
Sbjct:  590 RNNLTGTIPVEVGQLKVLHILELLGNNFSGSIPDELSNLTNLERLDLSNNNLSGRIPWSLTGLHFLSYFNVANNTLSGPIPTGTQFDTFPKANFEGNPLL 689          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.380e-12
Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = 3
Query:    9 NNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTS---APFEHITLNDFEKNPRLERPQLLALA 332
            N I   IP + GNL SL SLDL D+ ++ +IP ++ NLK L FL L+ + L G IP  L G+ +L  + + SN L G IP S    P  + T N+     R   P + A+A
Sbjct:  104 NGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQSLFEIPKYNFTSNNLNCGGRQPHPCVSAVA 214          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.380e-12
Identity = 38/100 (38.00%), Postives = 62/100 (62.00%), Query Frame = 3
Query:    6 KNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHITLNDFEKNPRL 305
            +N+I   +P + GNL S++ +DL ++D+S  IP  L  L++++ LRL ++ LTG + + L    SLTV++VS N+L G IP +  F   + + F  NP L
Sbjct:  460 RNHITGVVPGDFGNLRSIMEIDLSNNDISGPIPEELNQLQNIILLRLENNNLTGNVGS-LANCLSLTVLNVSHNNLVGDIPKNNNFSRFSPDSFIGNPGL 558          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.851e-12
Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 3
Query:   27 IPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTS---APFEHITLNDFEKNPRLERPQLLALA 332
            IP  LG L+ L+ LDL  +D+   IPPSL  L ++V + L ++ LTG+IP +L  + SL ++D S N L G IP      P E  +LN +E N   E P  +AL+
Sbjct:  221 IPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCRVPLE--SLNLYENNLEGELPASIALS 323          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.948e-12
Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:    9 NNIQRTIPVELGNLNSL-ISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHITLNDFEKNPRL 305
            N    +IP +LG L+SL I+++L  +D S +IPP + NL  L++L LN++ L+G+IPT    +SSL   + S N+L G +P +  F+++TL  F  N  L
Sbjct:  623 NLFSGSIPPQLGLLSSLQIAMNLSYNDFSGEIPPEIGNLHLLMYLSLNNNHLSGEIPTTFENLSSLLGCNFSYNNLTGQLPHTQIFQNMTLTSFLGNKGL 722          
The following BLAST results are available for this feature:
BLAST of CN184825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
BAK1_ARATH8.356e-1849.45BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK1_ARATH1.425e-1747.96Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK2_ARATH1.207e-1645.92Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK4_ARATH2.688e-1644.76Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK5_ARATH2.972e-1543.27Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
PSYR1_ARATH2.130e-1341.00Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y5129_ARATH1.380e-1239.64Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH1.380e-1238.00LRR receptor-like serine/threonine-protein kinase ... [more]
HSL1_ARATH6.851e-1240.95Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
Y2317_ARATH8.948e-1240.00Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006C23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184825 ID=CN184825; Name=CN184825; organism=Citrus sinensis; type=EST; length=382bp
TTTACAAAAACAACATCCAACGAACTATCCCTGTCGAGCTCGGTAACTTG
AACAGCCTCATCTCCTTGGACTTGTATGATAGCGACGTCTCGAAGAAAAT
CCCTCCTTCCTTGGCTAACTTGAAATCTCTTGTTTTTTTGCGGCTTAACG
ATCATCTACTAACTGGACAAATTCCCACGCAACTTGTTGGAATTTCAAGT
CTCACAGTTGTGGATGTTTCAAGCAATGATCTGTGTGGAACAATTCCTAC
AAGCGCACCATTTGAACACATCACACTCAACGACTTTGAGAAGAACCCTC
GATTAGAACGTCCACAGTTGCTGGCACTTGCAAGTTATGACACAAACTGC
TCACAGACGATTGATTGTTGCTTCAAGCTCTA
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