EY666463

Overview
NameEY666463
Unique NameEY666463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: CCR4C_ARATH (Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 4.848e-54
Identity = 102/166 (61.45%), Postives = 125/166 (75.30%), Query Frame = 3
Query:  240 WYNPLRRK--PFDEPSPDVLRHWIDADPNPISSD-ERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKVGYAGCYKRRTGYNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHKIKK 728
            W NPL R+  P   PS  + R WID+D  P+S   ERF+VVSYNILGD N+  HR+LY NV   Y+KW  RKRLIC+ELI LNPDII MQEVD+YFD+ ++MEK GYAG YKRRTG NVDGCAMFWKAD+F +LE+ +IEF +FG+R+NVAQL+  E    +K +K
Sbjct:   72 WQNPLPRRQHPDQIPSSQIARDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELIRLNPDIISMQEVDKYFDLFSMMEKAGYAGSYKRRTGDNVDGCAMFWKADRFGVLERENIEFSQFGMRDNVAQLAVLELRKSNKSRK 237          
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: CCR4E_ARATH (Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana GN=CCR4-5 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 4.380e-34
Identity = 67/157 (42.68%), Postives = 100/157 (63.69%), Query Frame = 3
Query:  255 RRKPFDEPSPDVLRHWIDADPNPISSDERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKVGYAGCYKRRTGYNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHKIK 725
            RR+  ++ S  V R W+ +  N  +  ++  +VSYN+LG  NA  H DLY NV  ++++W+RRK LIC+E+   N  I+C+QEVDR+ D+  +++  G+ G +K RTG   DGCA+FWK + F LL+   IEF +FG+R NVAQL   E + +   K
Sbjct:   71 RRRTKEKISSSVEREWVFSANNFENLADKLVLVSYNLLGVDNASNHMDLYYNVPRKHLEWSRRKHLICKEISRYNASILCLQEVDRFDDLDVLLKNRGFRGVHKSRTGEASDGCAIFWKENLFELLDHQHIEFDKFGMRNNVAQLCVLEMNCEEDPK 227          

HSP 2 Score: 28.8758 bits (63), Expect = 4.380e-34
Identity = 13/41 (31.71%), Postives = 26/41 (63.41%), Query Frame = 1
Query:  703 QMRNTKSRKVLGGNIPVLYNPNRRESEIRSNLVFFPQGPKL 825
            ++R++  R+++ GNI VL+NP R + ++    +F  +  KL
Sbjct:  231 RVRSSDPRRLVVGNIHVLFNPKRGDIKLGQVRLFLEKAYKL 271          
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: CCR4F_ARATH (Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana GN=CCR4-6 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.277e-26
Identity = 62/150 (41.33%), Postives = 92/150 (61.33%), Query Frame = 3
Query:  255 RRKPFDEPSPDVLRHWIDADPNPISSDERFSVVSYNILGDKNAFKH-RDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKVGYAGCYKRRTGYNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFE 701
            R++P  +PS    R W  A   P    E+F V+SYNIL D  A  H R LY ++    + W  RK  +  EL   + DI+C+QEVD++ D+   M+  GY+  +K RTG  VDGCA+FW++++F+L+ + SI+F + GLR+NVAQ+   E
Sbjct:  156 RQRPRSKPSD--YREWEYAKTPPSPGSEKFVVLSYNILADYLANDHWRSLYFHIPRNMLSWGWRKSKLVFELSLWSADIMCLQEVDKFQDLEEEMKHRGYSAIWKMRTGNAVDGCAIFWRSNRFKLVHEESIQFNQLGLRDNVAQICVLE 303          
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: ANGEL_DROME (Protein angel OS=Drosophila melanogaster GN=angel PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.550e-18
Identity = 59/172 (34.30%), Postives = 91/172 (52.91%), Query Frame = 3
Query:  273 EPSPDVLRHWIDA-------DPNPISSDERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVM---------EKVGYAGCYKRRTGYNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENVAQLSAFEADAQHKIKK 728
            E S D  R W          DP+  SS   F VVSYNIL      +H  LY  + +E++ W RR++ + +EL+ L+PDI+C+QE+   FD L V+         +K+ Y   YK++TG   DGCA+ + + KF LL+  ++E  +  +    R+NVA  + F    Q + +K
Sbjct:   41 ESSHDRNRRWTSLGNQAEGRDPHKCSS---FKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQQNLLRELLKLDPDILCLQEMQ--FDHLPVLVQRLRMGNGKKLAYV--YKKKTGCRTDGCAIVYDSSKFELLDHQAVELYDQAVALLNRDNVALFARFRFKKQQEQQK 205          
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: NOCT_RAT (Nocturnin (Fragment) OS=Rattus norvegicus GN=Ccrn4l PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.525e-15
Identity = 57/177 (32.20%), Postives = 85/177 (48.02%), Query Frame = 3
Query:  282 PDVLRHWIDADPNPISSDERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKVGYAG---------CYKRRTGYNVDGCAMFWKADKFRLLEQTSIEFKEFGLREN---VAQ-LSAFEADAQH-----KIKKSTGWEHTRS 755
            P   R ++D   +  SS     V+ +NIL      + +D +     E +KW  RK LI +E++   PDI+C+QEVD YFD L  ++ ++GY G         C         DGCA+F+   +F+L+  T+I      L+ N   +AQ L   E+  Q       +K  TGWE  RS
Sbjct:   47 PRYQRDFVDLRTDCSSSHPPIRVMQWNILAQALG-EGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTLQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFKLINSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRS 222          
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: NOCT_MOUSE (Nocturnin OS=Mus musculus GN=Ccrn4l PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.601e-15
Identity = 56/177 (31.64%), Postives = 85/177 (48.02%), Query Frame = 3
Query:  282 PDVLRHWIDADPNPISSDERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKVGYAG---------CYKRRTGYNVDGCAMFWKADKFRLLEQTSIEFKEFGLREN---VAQ-LSAFEADAQH-----KIKKSTGWEHTRS 755
            P   R ++D   +  SS     V+ +NIL      + +D +     E +KW  RK LI +E++   PDI+C+QEVD YFD    ++ ++GY G         C         DGCA+F+  ++F+L+  T+I      L+ N   +AQ L   E+  Q       +K  TGWE  RS
Sbjct:  121 PRYQRDFVDLRTDCSSSHSPIRVMQWNILAQALG-EGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRS 296          
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: CCR4_CRYNE (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Cryptococcus neoformans GN=CCR4 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  276 PSPDVLRHWIDADPN---PISS-DERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD--RYFDILNVM-EKVGYAGCYKRRTGYN---------VDGCAMFWKADKFRLLEQTSIEFKEFGLRE 674
            P P   R WID + +   P S   E FSV++YNIL    +F     Y       + W+ RKRL+ +E++  + D++C+QE+D  +Y D    M +K GY G +  R+            VDGCA FWK +KFRL+E   IEF +  L++
Sbjct:  363 PPPPPERQWIDLETDVDTPTSGKQESFSVLTYNILCA--SFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQEIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSVDEQKLVDGCATFWKEEKFRLVETQVIEFNQLALQK 509          
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: ANGE1_RAT (Protein angel homolog 1 OS=Rattus norvegicus GN=Angel1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14
Identity = 53/159 (33.33%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  252 LRRKPFDEPSPDVL-RHWIDADPNPISS--------DERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKVGYAGCYKRRTGYNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 680
            L+  P + P  ++L R W D    P +           +F+++SYNIL      +  +LY +   + + WN R   + QE    +PDI+C+QEV  D Y++ L   +  +G+   YKRRTG   DGCA+ +K  +FRLL  + +E+   GL    R+NV
Sbjct:  203 LQPPPMEIPYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 361          
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: ANGE1_MOUSE (Protein angel homolog 1 OS=Mus musculus GN=Angel1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14
Identity = 53/159 (33.33%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  252 LRRKPFDEPSPDVL-RHWIDADPNPISS--------DERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKVGYAGCYKRRTGYNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 680
            L+  P + P  ++L R W D    P +           +F+++SYNIL      +  +LY +   + + WN R   + QE    +PDI+C+QEV  D Y++ L   +  +G+   YKRRTG   DGCA+ +K  +FRLL  + +E+   GL    R+NV
Sbjct:  203 LQPPPMEIPYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 361          
BLAST of EY666463 vs. ExPASy Swiss-Prot
Match: NOCT_HUMAN (Nocturnin OS=Homo sapiens GN=CCRN4L PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.905e-14
Identity = 54/177 (30.51%), Postives = 84/177 (47.46%), Query Frame = 3
Query:  282 PDVLRHWIDADPNPISSDERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKVGYAG---------CYKRRTGYNVDGCAMFWKADKFRLLEQTSIEFKEFGLREN---VAQ-LSAFEADAQH-----KIKKSTGWEHTRS 755
            P   R ++D   +  S+     V+ +NIL      + +D +     E +KW  RK LI +E++   PDI+C+QEVD YFD    ++ ++GY G         C         DGCA+F+  ++F+L+   +I      L+ N   +AQ L   E+  Q       +K  TGWE  RS
Sbjct:  123 PRFQRDFVDLRTDCPSTHPPIRVMQWNILAQALG-EGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRS 298          
The following BLAST results are available for this feature:
BLAST of EY666463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
CCR4C_ARATH4.848e-5461.45Carbon catabolite repressor protein 4 homolog 3 OS... [more]
CCR4E_ARATH4.380e-3442.68Carbon catabolite repressor protein 4 homolog 5 OS... [more]
CCR4F_ARATH4.277e-2641.33Carbon catabolite repressor protein 4 homolog 6 OS... [more]
ANGEL_DROME9.550e-1834.30Protein angel OS=Drosophila melanogaster GN=angel ... [more]
NOCT_RAT1.525e-1532.20Nocturnin (Fragment) OS=Rattus norvegicus GN=Ccrn4... [more]
NOCT_MOUSE2.601e-1531.64Nocturnin OS=Mus musculus GN=Ccrn4l PE=2 SV=3[more]
CCR4_CRYNE3.397e-1536.24Glucose-repressible alcohol dehydrogenase transcri... [more]
ANGE1_RAT2.875e-1433.33Protein angel homolog 1 OS=Rattus norvegicus GN=An... [more]
ANGE1_MOUSE2.875e-1433.33Protein angel homolog 1 OS=Mus musculus GN=Angel1 ... [more]
NOCT_HUMAN4.905e-1430.51Nocturnin OS=Homo sapiens GN=CCRN4L PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666463 ID=EY666463; Name=EY666463; organism=Citrus sinensis; type=EST; length=833bp
GAGAGTGGTTACTTGTGGATCAATCAATGAGGTCCGAAGCCACTTCCTCC
TCTTCTTGGCTCGGCCGGATCCCACCAACGGCCACCTCCGCGCCGAGCGG
CGGCTCCGACAAGTTCCGGCACTTCATCTTCTTCTCCTCCTCCTGCTGCA
AGACTACAAACACCATTTCCTGTGGCTCCAATGGTCCCACCACACATTCC
TCATCATCATCGCCGTCAACTCGTTCGTACAGCCGTCGATGGTACAACCC
TCTCCGACGTAAGCCGTTCGATGAGCCTTCTCCTGACGTCCTCCGCCACT
GGATCGACGCTGATCCTAATCCAATTTCATCTGACGAGAGATTCTCGGTC
GTGTCATATAACATATTGGGAGATAAAAATGCTTTCAAACATAGAGATTT
ATATCAAAATGTTCGGTATGAATACATGAAATGGAACCGTCGCAAAAGGT
TAATATGCCAAGAGTTGATCGGATTGAACCCGGATATTATCTGTATGCAA
GAGGTGGACAGGTATTTTGATATTCTGAATGTTATGGAGAAAGTGGGATA
TGCTGGTTGTTACAAGCGGCGCACTGGGTATAACGTCGATGGTTGTGCGA
TGTTTTGGAAAGCTGATAAGTTTCGGTTATTAGAGCAAACAAGCATTGAA
TTTAAAGAGTTTGGGCTTCGTGAAAATGTGGCACAACTTTCCGCTTTTGA
GGCAGATGCGCAACACAAAATCAAGAAAAGTACTGGGTGGGAACATACCC
GTTCTTTATAATCCCAACCGAAGGGAAAGTGAAATTAGGTCAAATTTGGT
TTTCTTTCCTCAGGGGCCCAAACTCTTTGAAAA
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