CN184820

Overview
NameCN184820
Unique NameCN184820
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length262
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184820 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.877e-20
Identity = 36/64 (56.25%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   71 LAASGINMKRIEDVHTFHAYSEPLMEVLAFTSCPKKKVILVGHSLGGVTLALAANNFPHKISVA 262
            L+A+GIN +R++++HTF  YSEPLMEV+A +  P +KV+L+GHS GG++L LA   +P KISVA
Sbjct:   45 LSAAGINPRRLDEIHTFRDYSEPLMEVMA-SIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVA 107          

HSP 2 Score: 44.2838 bits (103), Expect = 1.877e-20
Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 1
Query:    1 GAWCWYKLKARLVAGGHRVTAVDLSRLG 84
            GAW WYKLK  L + GH+VTAVDLS  G
Sbjct:   22 GAWIWYKLKPLLESAGHKVTAVDLSAAG 49          
BLAST of CN184820 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 1.417e-16
Identity = 28/64 (43.75%), Postives = 46/64 (71.88%), Query Frame = 2
Query:   71 LAASGINMKRIEDVHTFHAYSEPLMEVLAFTSCPKKKVILVGHSLGGVTLALAANNFPHKISVA 262
            +AASG +  R+++V TF  YS PL++ +A  + P ++++LVGHS GG+++ALA   FP K++ A
Sbjct:   43 MAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAA 106          

HSP 2 Score: 42.3578 bits (98), Expect = 1.417e-16
Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 1
Query:    1 GAWCWYKLKARLVAGGHRVTAVDLSRLG 84
            GAWCWY++ A L A GHR TA+D++  G
Sbjct:   20 GAWCWYRVVAALRAAGHRATALDMAASG 47          
BLAST of CN184820 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 1.417e-16
Identity = 28/64 (43.75%), Postives = 46/64 (71.88%), Query Frame = 2
Query:   71 LAASGINMKRIEDVHTFHAYSEPLMEVLAFTSCPKKKVILVGHSLGGVTLALAANNFPHKISVA 262
            +AASG +  R+++V TF  YS PL++ +A  + P ++++LVGHS GG+++ALA   FP K++ A
Sbjct:   43 MAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAA 106          

HSP 2 Score: 42.3578 bits (98), Expect = 1.417e-16
Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 1
Query:    1 GAWCWYKLKARLVAGGHRVTAVDLSRLG 84
            GAWCWY++ A L A GHR TA+D++  G
Sbjct:   20 GAWCWYRVVAALRAAGHRATALDMAASG 47          
BLAST of CN184820 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 9.402e-15
Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 2
Query:   71 LAASGINMKRIEDVHTFHAYSEPLMEVLAFTSCPKKKVILVGHSLGGVTLALAANNFPHKISVA 262
            +AA+G +  R ++V +   YS PL++ +A  + P ++++LVGHSLGG++LALA   FP K++ A
Sbjct:   40 MAAAGAHPARADEVGSLEEYSRPLLDAVA-AAAPGERLVLVGHSLGGLSLALAMERFPDKVAAA 102          

HSP 2 Score: 42.743 bits (99), Expect = 9.402e-15
Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 1
Query:    1 GAWCWYKLKARLVAGGHRVTAVDLSRLG 84
            GAWCWY++ A L A GHR TA+D++  G
Sbjct:   17 GAWCWYRVVAALRAAGHRATALDMAAAG 44          
BLAST of CN184820 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 9.402e-15
Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 2
Query:   71 LAASGINMKRIEDVHTFHAYSEPLMEVLAFTSCPKKKVILVGHSLGGVTLALAANNFPHKISVA 262
            +AA+G +  R ++V +   YS PL++ +A  + P ++++LVGHSLGG++LALA   FP K++ A
Sbjct:   40 MAAAGAHPARADEVGSLEEYSRPLLDAVA-AAAPGERLVLVGHSLGGLSLALAMERFPDKVAAA 102          

HSP 2 Score: 42.743 bits (99), Expect = 9.402e-15
Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 1
Query:    1 GAWCWYKLKARLVAGGHRVTAVDLSRLG 84
            GAWCWY++ A L A GHR TA+D++  G
Sbjct:   17 GAWCWYRVVAALRAAGHRATALDMAAAG 44          
BLAST of CN184820 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.676e-13
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 2
Query:   71 LAASGINMKRIEDVHTFHAYSEPLMEVLAFTSCPKKKVILVGHSLGGVTLALAANNFPHKISVA 262
            LAASG++ ++IE++ +F  YSEPL+  L     P +KVILVG S GG+ +A+AA+ +  KI+ A
Sbjct:   38 LAASGVDPRQIEEIGSFDEYSEPLLTFLEALP-PGEKVILVGESCGGLNIAIAADKYCEKIAAA 100          

HSP 2 Score: 39.2762 bits (90), Expect = 1.676e-13
Identity = 17/28 (60.71%), Postives = 21/28 (75.00%), Query Frame = 1
Query:    1 GAWCWYKLKARLVAGGHRVTAVDLSRLG 84
            GAW W+KLK  L A GH+VTA+DL+  G
Sbjct:   15 GAWIWHKLKPLLEALGHKVTALDLAASG 42          
BLAST of CN184820 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 50.447 bits (119), Expect = 4.050e-11
Identity = 27/63 (42.86%), Postives = 44/63 (69.84%), Query Frame = 2
Query:   71 LAASGINMKRIEDVHTFHAYSEPLMEVLAFTSCPK-KKVILVGHSLGGVTLALAANNFPHKIS 256
            +AASGI+ ++IE +++F  YSEPL+  L     P+ +KVI+VG S  G+ +A+AA+ +  KI+
Sbjct:   38 MAASGIDPRQIEQINSFDEYSEPLLTFL--EKLPQGEKVIIVGESCAGLNIAIAADRYVDKIA 98          

HSP 2 Score: 38.5058 bits (88), Expect = 4.050e-11
Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1
Query:    1 GAWCWYKLKARLVAGGHRVTAVDLSRLG 84
            GAW W+KLK  L   GH+VTA+D++  G
Sbjct:   15 GAWIWHKLKPALERAGHKVTALDMAASG 42          
The following BLAST results are available for this feature:
BLAST of CN184820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PNAE_RAUSE1.877e-2056.25Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
PIR7B_ORYSJ1.417e-1643.75Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI1.417e-1643.75Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
PIR7A_ORYSJ9.402e-1542.19Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI9.402e-1542.19Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
HNL_HEVBR1.676e-1346.88Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
HNL_MANES4.050e-1142.86Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006C20_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184820 ID=CN184820; Name=CN184820; organism=Citrus sinensis; type=EST; length=262bp
GGAGCATGGTGTTGGTACAAACTGAAAGCAAGGCTGGTGGCGGGGGGTCA
CCGGGTGACGGCTGTGGACCTTAGCCGCCTCGGGCATCAACATGAAGAGA
ATTGAGGATGTGCACACATTCCATGCATACAGTGAGCCCTTGATGGAGGT
TTTGGCATTCACTTCCTGCCCGAAGAAAAAGGTCATACTTGTCGGACACA
GTCTTGGGGGCGTCACTTTGGCCCTTGCCGCCAACAATTTCCCACACAAA
ATCTCCGTGGCT
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