CN184818

Overview
NameCN184818
Unique NameCN184818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA4_ARATH (Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 1.890e-79
Identity = 142/194 (73.20%), Postives = 158/194 (81.44%), Query Frame = 3
Query:   39 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRR-----DEEEESGSGFNFKSFLHKKVENAFESRGIHI 605
            MTKKAVLIGINYPGTKAEL+GCVNDV+RMY CLV+RYGFSEENITVLIDTD+ STQPTG+NIRRAL +LV SA+ GDVL VHYSGHGTRLPA            CIVP DMNLITDDDFR+ VD++PPGC +T++SDSCHSGGLIDEAKEQIGEST++     DE EES S F F+ FL  KVE A ESRG HI
Sbjct:    1 MTKKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTDESSTQPTGKNIRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMNLITDDDFRDLVDKVPPGCRMTIISDSCHSGGLIDEAKEQIGESTKKEAEDEDESEESSSRFGFRKFLRSKVEGAIESRGFHI 194          

HSP 2 Score: 26.9498 bits (58), Expect = 1.890e-79
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  680 GEGGYHKNKSLPLSTLIEIL 739
            GE  + K+KSLPL TLI+IL
Sbjct:  217 GETIHAKDKSLPLQTLIDIL 236          
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA5_ARATH (Metacaspase-5 OS=Arabidopsis thaliana GN=AMC5 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.929e-71
Identity = 136/226 (60.18%), Postives = 165/226 (73.01%), Query Frame = 3
Query:   39 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESG--SGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDS*SLKPDMVREVIIRTSP 710
            M KKAVLIGINYPGTKAEL+GCVNDV+R++  LVDR+GFSE NIT LIDTD+ ST+PTG+NIRRAL NLV SA+PGDVL VHYSGHGTRLPA            CIVP DMNLITDD+FR+ V+++P    IT++SDSCHSGGLIDEAKEQIGEST++  ++ESG  SG   K F+ + VE A ES+GI IP    HH+   DE+      L+      V+ ++ P
Sbjct:    1 MAKKAVLIGINYPGTKAELRGCVNDVRRVHKSLVDRFGFSERNITELIDTDESSTKPTGKNIRRALLNLVESAKPGDVLVVHYSGHGTRLPAETGEDDDTGYDECIVPCDMNLITDDEFRDLVEKVPKEAHITIISDSCHSGGLIDEAKEQIGESTKKKPKKESGGSSGLGIKGFVREAVEEALESKGIAIP----HHKDEKDENKTKELKLEDGAKVHVVNKSLP 222          

HSP 2 Score: 25.0238 bits (53), Expect = 2.929e-71
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  701 NKSLPLSTLIEIL 739
            NKSLPL TLI+IL
Sbjct:  218 NKSLPLQTLIDIL 230          
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA7_ARATH (Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.504e-61
Identity = 115/178 (64.61%), Postives = 137/178 (76.97%), Query Frame = 3
Query:   39 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTR---RDEEEESGSGFNFKSFLH 563
            M K+A+LIGINYPGT  EL+GCVNDV RM+ CLVDR+GF+EE+ITVLIDTD+  TQPTG+NIR+AL  L++ A+ GDVLFVHYSGHGTR+P             CIVPSD+N I DDDFR+ V+Q+P GC+IT+VSDSCHSGGLIDEAKEQIGEST      E + S   F FK+ LH
Sbjct:    1 MAKRALLIGINYPGTTEELQGCVNDVHRMHKCLVDRFGFAEEDITVLIDTDESYTQPTGKNIRQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTGFDECIVPSDLNPIPDDDFRDLVEQVPEGCQITIVSDSCHSGGLIDEAKEQIGESTTTKPNRESKVSSFEFEFKNCLH 178          
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA6_ARATH (Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.748e-61
Identity = 114/169 (67.46%), Postives = 132/169 (78.11%), Query Frame = 3
Query:   39 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSGFN 545
            M KKA+LIGINY GTKAEL+GCVNDV+RM   LV+RYGFSEENI +LIDTD  S +PTG+NIR+AL +LV  A+ GDVLFVHYSGHGTRLPA            CIVPSDMNLITDDDFR+ VD +P  C IT++SDSCHSGGLIDEAKEQIGEST++ ++    S  N
Sbjct:    1 MAKKALLIGINYVGTKAELRGCVNDVRRMRISLVERYGFSEENIKMLIDTDSSSIKPTGKNIRQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFRDLVDMVPKDCPITIISDSCHSGGLIDEAKEQIGESTKKKKDSGDSSTIN 169          
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA8_ARATH (Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 103/237 (43.46%), Postives = 133/237 (56.12%), Query Frame = 3
Query:   39 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRL-PAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRR---------DEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDS*SLKPDMVREVIIRTSPYPS 719
            M KKA+LIGINYPGT  EL+GCVNDV RM  CL++ YGF+ ++I ++IDTD    QPTG+NI   L NL+ S + GD L  HYSGHGTR+ P             CI P DMNLI D  FRE V ++  GC++T++SDSCHSGGLI E KEQIGES  +         +E           S+    V N   + G+   S  +  R  G+E       L+ D   ++  R  P+ S
Sbjct:    1 MAKKALLIGINYPGTAVELRGCVNDVHRMQKCLIELYGFANKDIVIMIDTDKSCIQPTGKNICDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDMNLIKDQQFREMVSRVKEGCQLTIISDSCHSGGLIQEVKEQIGESHMKPVDKVKEQIEESHMKQPKLGIASYFLNIVMNLLATCGV---SKSQRDRGGGEESFRGEIELEKDETLDIKTRYLPFES 234          
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA9_ARATH (Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39
Identity = 83/164 (50.61%), Postives = 108/164 (65.85%), Query Frame = 3
Query:   27 EENKMTKK--AVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPG--DVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGEST 506
            ++  M KK  AVL+G NYP T+ EL GC+NDV  M   ++ R+GF +++I VL D  +   +PTG NI+ AL  +V  A+ G  D+LF HYSGHGTR+P+             IVP D NLITD DFRE V+Q+P G   T++SDSCHSGGLID+ KEQIG S+
Sbjct:    2 DQQGMVKKRLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTDEPESKVKPTGANIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFKQDE-AIVPCDFNLITDVDFRELVNQLPKGTSFTMISDSCHSGGLIDKEKEQIGPSS 164          
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPOR (Metacaspase-1A OS=Aspergillus oryzae GN=casA PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.508e-24
Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 3
Query:   42 TKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 476
            T+KA+LIGINY   K +L+GC+NDVK M   L + +G+  EN+ +L D      +QPT  NI RA+  LV+ A+P D LF HYSGHG + P              I P D     +++ D+  R  V+ + PG  +T + DSCHSG  +D
Sbjct:  105 TRKALLIGINYFNQKGQLRGCINDVKNMSTYLHENFGYPRENMVLLTDDQQNPKSQPTKANILRAMHWLVKDAKPNDSLFFHYSGHGGQTP-DLDGDEDDGYDEVIYPVDFRQAGHIVDDEMHRIMVNPLQPGVRLTAIFDSCHSGSALD 253          
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA1_PICST (Metacaspase-1 OS=Pichia stipitis GN=MCA1 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24
Identity = 63/149 (42.28%), Postives = 84/149 (56.38%), Query Frame = 3
Query:   45 KKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLI-DTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 476
            KKA+L+G+NY G+  EL+GC+NDVK M + LVD +G+   +I +L  D +D S  PT  NI RA+  LV+ A P D L  HYSGHG    A             I P D     +++ DD     V  +PPGC +T + DSCHSG  +D
Sbjct:  109 KKALLVGVNYFGSPNELRGCINDVKNMSSFLVDHWGYQWNDIVILTDDQNDISRVPTKNNIIRAMQWLVKDARPNDSLVFHYSGHG-GTTADTDGDEESGYDDVIYPVDFQQAGHIVDDDMHAIMVRPLPPGCRLTALYDSCHSGTALD 256          
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA1_EMENI (Metacaspase-1 OS=Emericella nidulans GN=casA PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.297e-24
Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 3
Query:   45 KKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 476
            +KA+LIGINY G K +L+GC+NDVK M   L   +G++ E++ +L D      +QPT  NI RA+  LV+ A+P D LF HYSGHG + P              I P D     +++ D+  R  V  + PG  +T + DSCHSG  +D
Sbjct:  111 RKALLIGINYFGQKGQLRGCINDVKNMSTYLNQNFGYAREDMVILTDDQQNPMSQPTKANILRAMHWLVKDAQPNDSLFFHYSGHGGQTP-DLDGDEDDGYDEVIYPVDFRVAGHIVDDEMHRIMVKPLQPGVRLTAIFDSCHSGSALD 258          
BLAST of CN184818 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPTN (Metacaspase-1A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=casA PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.297e-24
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 3
Query:   45 KKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 476
            +KA+LIGINY G K +L+GC+NDVK M   L   +G++ E++ +L D      +QPT  NI RA+  LV+ A+P D LF HYSGHG + P              I P D     +++ D+  R  V+ + PG  +T + DSCHSG  +D
Sbjct:  110 RKALLIGINYFGQKGQLRGCINDVKNMSTYLNQNFGYAREDMVLLTDDQQNPMSQPTKANILRAMHWLVKDAQPNDSLFFHYSGHGGQTP-DLDGDEDDGYDEVIYPVDFRVAGHIVDDEMHRIMVNPLKPGTRLTAIFDSCHSGSALD 257          
The following BLAST results are available for this feature:
BLAST of CN184818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
MCA4_ARATH1.890e-7973.20Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1... [more]
MCA5_ARATH2.929e-7160.18Metacaspase-5 OS=Arabidopsis thaliana GN=AMC5 PE=1... [more]
MCA7_ARATH1.504e-6164.61Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1... [more]
MCA6_ARATH9.748e-6167.46Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1... [more]
MCA8_ARATH4.248e-4843.46Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1... [more]
MCA9_ARATH2.760e-3950.61Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1... [more]
MCA1A_ASPOR2.508e-2440.67Metacaspase-1A OS=Aspergillus oryzae GN=casA PE=3 ... [more]
MCA1_PICST4.278e-2442.28Metacaspase-1 OS=Pichia stipitis GN=MCA1 PE=3 SV=1[more]
MCA1_EMENI7.297e-2440.27Metacaspase-1 OS=Emericella nidulans GN=casA PE=2 ... [more]
MCA1A_ASPTN7.297e-2440.27Metacaspase-1A OS=Aspergillus terreus (strain NIH ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006C18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006C18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184818 ID=CN184818; Name=CN184818; organism=Citrus sinensis; type=EST; length=741bp
GAGGGTTTCTTTTGAGATTATCAGAAGAGGAAAACAAAATGACGAAAAAA
GCGGTGTTAATAGGCATAAACTACCCGGGAACGAAAGCGGAGCTGAAGGG
GTGCGTTAACGACGTTAAACGGATGTATGCATGTTTGGTGGATCGTTACG
GATTCTCGGAGGAGAACATAACGGTGTTGATCGATACGGATGATAGGTCT
ACCCAGCCGACTGGGCGGAATATTAGGAGGGCTTTGGGCAATTTGGTGCG
ATCGGCTGAGCCCGGTGACGTGCTGTTTGTTCACTACAGCGGGCATGGGA
CCAGGCTTCCTGCTGAGACTGGGGAGGACGACGATACTGGTTATGATGAG
TGCATTGTTCCTTCTGATATGAATCTTATTACTGATGATGATTTCAGGGA
GTTTGTAGACCAAATCCCACCAGGTTGTGAGATAACAGTTGTATCTGATT
CTTGCCATAGTGGTGGCCTTATTGATGAGGCTAAGGAACAGATTGGGGAG
AGCACAAGGCGTGATGAAGAGGAAGAATCTGGTTCTGGTTTTAACTTCAA
AAGCTTCTTGCACAAGAAAGTGGAAAATGCATTTGAATCTCGTGGAATTC
ACATTCCTTCTGGGCTGCGCCATCACCGCCCTAGTGGTGATGAAGATGTT
GAAGATTCGTGAAGTTTGAAGCCGGATATGGTGAGGGAGGTTATCATAAG
AACAAGTCCCTACCCCTCTCAACACTTATTGAAATACTCAA
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