DC887513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887513 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 7.389e-19 Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = -1 Query: 472 IFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFVNRKDAEVALQKLQGTAIGKQTVRLSWGRN 684 +FVG L VS+E+L+ F FGEI+ VKIP GKGCGFVQFVNR+ AE+A+ +LQG +G +RLSWGRN Sbjct: 305 VFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
BLAST of DC887513 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.454e-15 Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = -1 Query: 472 IFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFVNRKDAEVALQKLQGTAIGKQTVRLSWGRN 684 +FVG L S++S++DL+ F FG IL++KIP GKGCGFVQ+ + AE A+ +QG +G +RL+WG N Sbjct: 299 VFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369
BLAST of DC887513 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = -1 Query: 472 IFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFVNRKDAEVALQKLQGTAIGKQTVRLSWGRN 684 +F+G L S V++++LR F FG I+ VKIPVGK CGFVQ+V+R AE A+ +QG I VRLSWGR+ Sbjct: 315 VFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
BLAST of DC887513 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = -1 Query: 475 IFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFVNRKDAEVALQKLQGTAIGKQTVRLSWGR 684 +FVG L ++ LR F FG IL+V+IP GK CGFV+F R DAE ++Q LQG +G +RLSWGR Sbjct: 362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR 431 The following BLAST results are available for this feature:
BLAST of DC887513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887513 ID=DC887513; Name=DC887513; organism=Citrus sinensis; type=EST; length=756bpback to top |