EY666458

Overview
NameEY666458
Unique NameEY666458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H48_CHICK (Histone H4 type VIII OS=Gallus gallus GN=H4-VIII PE=3 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 5.489e-23
Identity = 56/81 (69.14%), Postives = 64/81 (79.01%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LK+FLENVIRDAVT  EH  RKTVTAMDV YA+ RQ+ T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQERT 97
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H4_SILLA (Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 9.362e-23
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LKIFLENVIRDAVT  EH  RKTVTAMDV YA+ RQ  T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 9.362e-23
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LKIFLENVIRDAVT  EH  RKTVTAMDV YA+ RQ  T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H4_MAIZE (Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 9.362e-23
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LKIFLENVIRDAVT  EH  RKTVTAMDV YA+ RQ  T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H4_LOLTE (Histone H4 OS=Lolium temulentum PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 9.362e-23
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LKIFLENVIRDAVT  EH  RKTVTAMDV YA+ RQ  T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H4_FLATR (Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 9.362e-23
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LKIFLENVIRDAVT  EH  RKTVTAMDV YA+ RQ  T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 9.362e-23
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LKIFLENVIRDAVT  EH  RKTVTAMDV YA+ RQ  T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 9.362e-23
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LKIFLENVIRDAVT  EH  RKTVTAMDV YA+ RQ  T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 9.362e-23
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LKIFLENVIRDAVT  EH  RKTVTAMDV YA+ RQ  T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of EY666458 vs. ExPASy Swiss-Prot
Match: H42_WHEAT (Histone H4 variant TH091 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 9.362e-23
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:  100 QRHRNELPNTLQGILKPAIRRLARTCGV*RIYGLIYQETLGILKIFLENVIRDAVT*PEHITRKTVTAMDVGYAI*RQDTT 342
            +RHR  L + +QGI KPAIRRLAR  GV RI GLIY+ET G+LKIFLENVIRDAVT  EH  RKTVTAMDV YA+ RQ  T
Sbjct:   17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
The following BLAST results are available for this feature:
BLAST of EY666458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H48_CHICK5.489e-2369.14Histone H4 type VIII OS=Gallus gallus GN=H4-VIII P... [more]
H4_SILLA9.362e-2370.37Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3[more]
H4_PEA9.362e-2370.37Histone H4 OS=Pisum sativum PE=1 SV=2[more]
H4_MAIZE9.362e-2370.37Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2[more]
H4_LOLTE9.362e-2370.37Histone H4 OS=Lolium temulentum PE=3 SV=2[more]
H4_FLATR9.362e-2370.37Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3[more]
H4_EUCGL9.362e-2370.37Histone H4 OS=Eucalyptus globulus PE=3 SV=3[more]
H4_CHEMJ9.362e-2370.37Histone H4 OS=Chelidonium majus PE=3 SV=3[more]
H4_ARATH9.362e-2370.37Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE... [more]
H42_WHEAT9.362e-2370.37Histone H4 variant TH091 OS=Triticum aestivum PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666458 ID=EY666458; Name=EY666458; organism=Citrus sinensis; type=EST; length=436bp
AACATCTCTTACTAGGAGCAAGCGGAAAGTCCTTTAAGTTCCTCGCGTAA
AATGACTGGGCACGTTAAGGGAGGCAAGGGAGTGGGACAAGGATGCACCC
AGCGTCACCGTAATGAGCTTCCCAATACCCTTCAGGGTATCCTGAAGCCA
GCAATCAGGCGTTTGGCTCGTACATGTGGAGTCTAGCGTATCTATGGCTT
GATCTACCAGGAAACACTTGGCATCCTGAAAATATTCTTGGAGAACGTCA
TCCGCGACGCCGTGACCTAACCTGAGCACATCACGAGAAAGACCGTGACC
GCTATGGACGTCGGTTACGCTATATAGAGGCAAGATACGACTCTTTATGG
ATTTGGGGGTTACTTGTATTATAGGTCAGGAAGTGAATGTGATTACATAT
TGACTCTATATCTTGATATGGTACATGAGGCTCTTA
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