DC887499

Overview
NameDC887499
Unique NameDC887499
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length304
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887499 vs. ExPASy Swiss-Prot
Match: STIP_SOYBN (Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.101e-17
Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = -1
Query:  122 KERQAKGMQDPEIQNILSDPVMRQVLVDFQENPKAAQDHMKNPQVMNKIQKLINAGIVQMR 304
            KERQAK MQDPEIQ+IL DPVM QVL DFQENP+AA++H+KNP VMNK Q +   G  QMR
Sbjct:  510 KERQAKAMQDPEIQSILQDPVMTQVLTDFQENPRAAEEHVKNPMVMNKTQNVTVPG-CQMR 569          
BLAST of DC887499 vs. ExPASy Swiss-Prot
Match: STIP1_DICDI (Protein STIP1 homolog OS=Dictyostelium discoideum GN=sti1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.734e-16
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = -1
Query:  125 KERQAKGMQDPEIQNILSDPVMRQVLVDFQENPKAAQDHMKNPQVMNKIQKLINAGIVQM 304
            +ER  +  +DPEIQ ILSDP+M Q+L D  ENP AAQDH+KNP +M K QKL+NAGIV++
Sbjct:  504 EERLQQAAKDPEIQKILSDPIMNQILKDMSENPAAAQDHLKNPLIMAKFQKLVNAGIVKL 563          
BLAST of DC887499 vs. ExPASy Swiss-Prot
Match: STI1_YEAST (Heat shock protein STI1 OS=Saccharomyces cerevisiae GN=STI1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.971e-11
Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = -1
Query:  128 KERQAKGMQDPEIQNILSDPVMRQVLVDFQENPKAAQDHMKNPQVMNKIQKLINAGIVQ 304
            +E   + M+DPE+  I+ DPVM+ +L   Q+NP A Q+HMKNP+V  KIQ LI AGI++
Sbjct:  528 EETYQRAMKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKIQTLIAAGIIR 586          
The following BLAST results are available for this feature:
BLAST of DC887499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
STIP_SOYBN4.101e-1770.49Heat shock protein STI OS=Glycine max GN=STI PE=2 ... [more]
STIP1_DICDI7.734e-1661.67Protein STIP1 homolog OS=Dictyostelium discoideum ... [more]
STI1_YEAST1.971e-1150.85Heat shock protein STI1 OS=Saccharomyces cerevisia... [more]
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Properties
Property NameValue
Genbank descriptionDC887499 EIC Citrus sinensis cDNA clone EIC0460 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887499 ID=DC887499; Name=DC887499; organism=Citrus sinensis; type=EST; length=304bp
TCAATTTCCAACTGAAAACCGTTTTTAACAATTACTCCACTCAAATTCAC
ACAGAAAATTTAATTCACTGAAGATTAAGCTAAAAAATATCCTTGTCTGT
TGTAAAGTTACTCCAAATTTATCTCATCTGGACAATCCCTGCATTGATCA
GCTTCTGAATCTTATTCATCACCTGTGGGTTCTTCATGTGATCTTGAGCA
GCTTTAGGATTTTCCTGGAAGTCAACCAACACCTGTCTCATGACTGGGTC
AGAGAGTATGTTCTGAATTTCGGGGTCCTGCATTCCCTTGGCTTGTCTCT
CCTT
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