DC887487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_STAPU (Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum punctulatum GN=pdhB PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.797e-71 Identity = 133/171 (77.78%), Postives = 150/171 (87.72%), Query Frame = -3 Query: 148 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 660 NAKGL+K++IRSENPVILFEHVLLYNLKE IPD EY+ LE+AE+VRPG +TILTYSRMR+HV+QA K+LV KGYDPE+IDI SLKP DL TI SIKKTH+VLIVEECMRTGGIGASL A I E+ D+LDAPI+CLSSQDVPTPY+G LEE TV+QPAQIV AVEQLC Sbjct: 153 NAKGLIKSSIRSENPVILFEHVLLYNLKETIPDNEYLVCLEKAEIVRPGTDITILTYSRMRHHVLQATKSLVYKGYDPEIIDIVSLKPVDLGTISTSIKKTHKVLIVEECMRTGGIGASLRATIMEHLFDFLDAPIMCLSSQDVPTPYSGPLEELTVIQPAQIVQAVEQLC 323
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_ZYGCR (Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema circumcarinatum GN=pdhB PE=3 SV=2) HSP 1 Score: 260.381 bits (664), Expect = 6.062e-69 Identity = 127/172 (73.84%), Postives = 151/172 (87.79%), Query Frame = -3 Query: 145 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 660 NAKGL+K+AIRS+NP+ILFEHVLLYNLKE + +EEY+ LE+AE+VRPG +TILTYSRMR++V+QA K+LV KGYDPE+IDI SLKPFDL TIG S+ KTH+VLIVEECMRTGGIGA+L AAI E+F DYLDAPI+CLSSQDVPTPY+ LEE TV+QP QI+ VEQLC+ Sbjct: 153 NAKGLIKSAIRSDNPIILFEHVLLYNLKEDLAEEEYLVCLEKAEVVRPGNDITILTYSRMRHNVLQATKSLVYKGYDPEIIDIVSLKPFDLGTIGASVCKTHKVLIVEECMRTGGIGATLRAAIMEHFFDYLDAPILCLSSQDVPTPYSSPLEELTVIQPNQIIQVVEQLCE 324
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 8.753e-68 Identity = 123/172 (71.51%), Postives = 148/172 (86.05%), Query Frame = -3 Query: 145 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 660 N KGL+K+AIR++NPVI FEHVLLYNL E + ++EY+ LE+AE+VRPG +TILTYSRMR+HV+QAAK LVNKGYDPE+IDI SLKP D+ TI S++KTH+VLIVEECMRTGGIGASL AAI E+ DYLDAPI CLSSQDVPTPY+G LEE TV+QP QI+ AVE++C+ Sbjct: 153 NGKGLLKSAIRNDNPVIFFEHVLLYNLNENLIEQEYLLCLEKAEVVRPGNDITILTYSRMRHHVLQAAKVLVNKGYDPEIIDILSLKPLDMGTISLSVRKTHKVLIVEECMRTGGIGASLRAAILEDLFDYLDAPIQCLSSQDVPTPYSGPLEELTVIQPNQIIQAVEEMCK 324
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.636e-64 Identity = 116/170 (68.24%), Postives = 144/170 (84.71%), Query Frame = -3 Query: 151 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 660 NAKGL+K+AIRS+NP+I FEHVLLYN+KE IP +EY+ LE+AE+VR G +TILTYSRMRYHV+QAAKTL+ KGYDPE+IDI SLKP D+ TI S++KTH+VLIVEECM+TGGIG +L +AI E+ D+LD PI+ LSSQDVPTPY G LE+ TV+QP+QIV A E++ Sbjct: 153 NAKGLIKSAIRSQNPIIFFEHVLLYNIKENIPQKEYLVPLEKAELVRSGNQITILTYSRMRYHVLQAAKTLIEKGYDPEIIDIISLKPLDMGTISTSLRKTHKVLIVEECMKTGGIGTTLKSAILESLFDFLDTPIMSLSSQDVPTPYNGFLEDLTVIQPSQIVEAAEKI 322
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.655e-58 Identity = 108/170 (63.53%), Postives = 138/170 (81.18%), Query Frame = -3 Query: 151 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 660 NAKGL+K+AIR NPV+ FEHVLLYNL+E IP++EY+ L++AE+VR G+ +TILTYSRMR+HV +A L+N GYDPEV+D+ SLKP D+ +I S+KKTHRVLIVEECM+T GIGA L A I E+ D LDAP+V LSSQD+PTPY G+LE+ TV+QP QI+ AV+ + Sbjct: 153 NAKGLLKSAIRDNNPVVFFEHVLLYNLQEEIPEDEYLIPLDKAEVVRKGKDITILTYSRMRHHVTEALPLLLNDGYDPEVLDLISLKPLDIDSISVSVKKTHRVLIVEECMKTAGIGAELIAQINEHLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPHQIIDAVKNI 322
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.655e-58 Identity = 108/170 (63.53%), Postives = 137/170 (80.59%), Query Frame = -3 Query: 151 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 660 NAKGL+K+AIR NPVI FEHVLLYNLK+ +P++EY L++AE+VR G VTILTYSRMR+HVMQA LVN GY+PEVID+ SLKP D+ +I S+ KTH+++IVEECM+TGGIGA + A I +N+ D+LDAPIV LSSQD+PTPY G LE+ TV+ P QI+ AV+ + Sbjct: 153 NAKGLLKSAIRDNNPVIFFEHVLLYNLKDELPNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVDLVNDGYNPEVIDLISLKPLDITSIAQSLMKTHKLIIVEECMKTGGIGAEIIAQINDNYFDFLDAPIVRLSSQDIPTPYNGKLEKATVIYPQQIIEAVKSI 322
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.829e-57 Identity = 108/170 (63.53%), Postives = 134/170 (78.82%), Query Frame = -3 Query: 151 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 660 NAKGL+K+AIR NPV+ FEHVLLYNL+E IP EEY L + E VR G+ +TILTYSRMR+HV+QA L+ +GYDPEVID+ SLKP D+ +I S+KKTH+VLIVEECM+T GIGA L A I E D LDAP+V LSSQD+PTPY G+LE+ TV+QP+QIV +V+ + Sbjct: 153 NAKGLLKSAIRDNNPVVFFEHVLLYNLQEEIPQEEYFLPLNKVEFVRKGKDITILTYSRMRHHVIQALPALLKEGYDPEVIDLISLKPLDIDSISISVKKTHKVLIVEECMKTAGIGAELIAQINEYLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPSQIVDSVKSI 322
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_MESVI (Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma viride GN=pdhB PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 9.079e-57 Identity = 108/170 (63.53%), Postives = 134/170 (78.82%), Query Frame = -3 Query: 151 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 660 NAKGL+K+AIRS+NP+ EHVLLYNLK +PD +Y+ LE+AE+VR G +TILTYSRMRY+V+QA K LV KGYDPE+ID+ SLKPFD+ TIG SI+KTH+VLIVEE M TGGI L + I ENF D LD +CLSS +VPTPY+G LEE ++VQ A I+ +VEQ+ Sbjct: 153 NAKGLLKSAIRSKNPIFFLEHVLLYNLKAEVPDNDYVLPLEKAEIVRQGNDITILTYSRMRYNVIQAVKVLVEKGYDPEIIDLISLKPFDIETIGKSIQKTHKVLIVEESMMTGGISNVLQSLILENFFDDLDNRPMCLSSPNVPTPYSGPLEEVSIVQTADIIESVEQI 322
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.236e-55 Identity = 105/168 (62.50%), Postives = 131/168 (77.98%), Query Frame = -3 Query: 157 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVE 660 NAKGL+K+AIRS+NP++ EHVLLYNLK +PD +Y+ LE+AE+VR G +T+LTYSR RY+V+QA K LV +GYDPEVID+ SLKPFD+ TIG SI+KTH+VLIVEECM TGGI L + I +NF D LDA + LSS +VPTPY G LEE TVVQ I+ ++E Sbjct: 153 NAKGLLKSAIRSKNPILFIEHVLLYNLKGEVPDNDYLLPLEKAELVREGSDITVLTYSRQRYNVIQAVKVLVEEGYDPEVIDLISLKPFDMETIGKSIQKTHKVLIVEECMMTGGISNVLQSLIIDNFFDALDAAPLILSSPNVPTPYTGPLEEATVVQTIDIIESIE 320
BLAST of DC887487 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.314e-52 Identity = 104/170 (61.18%), Postives = 129/170 (75.88%), Query Frame = -3 Query: 151 NAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 660 NAKGL+KAAIR NPV+ EHVLLYNLK+ IP +EY+ L++A++VR G VTI+TYSRM +HVMQA K LV +G +PEVID+ SLKP DL T+ S+ KTH+ +IVEECM+TGGI A + A I + D LDAPI LSS+DVPTPY G LE+ +VQP QIV AV+ L Sbjct: 154 NAKGLLKAAIRDNNPVLFLEHVLLYNLKQEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEVIDLISLKPIDLETLVTSVSKTHKAIIVEECMQTGGIAAEVMAQIYSHAFDELDAPIRRLSSKDVPTPYNGYLEQACLVQPTQIVEAVKTL 323 The following BLAST results are available for this feature:
BLAST of DC887487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887487 ID=DC887487; Name=DC887487; organism=Citrus sinensis; type=EST; length=662bpback to top |