EY666451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666451 vs. ExPASy Swiss-Prot
Match: COP1_ARATH (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2) HSP 1 Score: 386.341 bits (991), Expect = 1.122e-106 Identity = 191/279 (68.46%), Postives = 223/279 (79.93%), Query Frame = 3 Query: 6 MDEVSTEPVVPAVKPDMKPSSXXXXXXXXXXXXXXXXXXXXXXVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMPGDDSNTRKSWLSSIDKNSSGIITSSLNAEGGSSAGSLQNRKGMGKLQQTFLGTPKE 842 M+E+ST+PVVPAVKPD + SS +G +LDKD+LCPICMQIIK+AFLTACGHSFCYMCIITHLRNKSDCPCC +LTNNQLYPNFLLDKLLKKTSAR +SKTASPL+ FR+ALQ+GC VS+KE+D+L++LL+E+KRKMEQEEAERNMQILLDFLHCLRKQKVDEL E+QTDL YIKEDINAVERHRIDLYRARDRYSVKLRM GDD +TR +W +KN G ++SL+ GG+ G+ QN+K GK Q + G PK+ Sbjct: 1 MEEISTDPVVPAVKPDPRTSSVGEGANRHENDDGGSGGSE---IGAPDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAW--PHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKK 274
BLAST of EY666451 vs. ExPASy Swiss-Prot
Match: COP1_PEA (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 1.243e-97 Identity = 188/271 (69.37%), Postives = 215/271 (79.34%), Query Frame = 3 Query: 6 MDEVSTEPVVPAV-KPDMKPSSXXXXXXXXXXXXXXXXXXXXXXVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMPGDDSNTRKSWLSSIDKNSSGIITSSLNAEGGSSAGSLQNRKGMGKLQ 815 M+E S P+VPAV KP+ PS +S+LDKD LCPICMQIIK+AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN+ L+PNFLLDKLLKKTS RQISKTASP+E+FRQA+Q+GC V++KE+D+L+ LL+EKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKE+QTDL +IKEDI AVE+HR+DLYRARDRYSVKLRM DDS RKS SS+D NSSG+ +S LN GG S+GS +K GK Q Sbjct: 1 MEEHSVGPLVPAVVKPE--PSKNFSTDTTAAGTFLLVPT-------MSDLDKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDRQISKTASPVEHFRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGS-HTKKNDGKSQ 260
BLAST of EY666451 vs. ExPASy Swiss-Prot
Match: RFWD2_HUMAN (E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.833e-24 Identity = 59/165 (35.76%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 159 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 614 D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++E E +QIL++FL R+ K ++L++IQ +L ++EDI VE Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVE 297
BLAST of EY666451 vs. ExPASy Swiss-Prot
Match: RFWD2_MOUSE (E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24 Identity = 57/165 (34.55%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 159 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR------QISKTASPLENFRQALQQGC------GVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 614 D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K R ++ + S R + Q + + ++ ++ LL +KK+++E E +QIL++FL R+ K ++L++IQ +L ++EDI VE Sbjct: 135 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVE 299 The following BLAST results are available for this feature:
BLAST of EY666451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY666451 ID=EY666451; Name=EY666451; organism=Citrus sinensis; type=EST; length=848bpback to top |