CN184688

Overview
NameCN184688
Unique NameCN184688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1447 contig Csv1_Contig1447:879..1370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184688 vs. ExPASy Swiss-Prot
Match: ADK2_ARATH (Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 4.636e-36
Identity = 70/82 (85.37%), Postives = 78/82 (95.12%), Query Frame = -2
Query:  204 ITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 449
            ITQGADPVVVAEDGKVK +PVI LPKEKLVDTNGAGDAFVGGF+SQLV+EK +E+CV+AGCYA+NVVIQRSGCTYP KP+FN
Sbjct:  264 ITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFMSQLVKEKSIEECVKAGCYASNVVIQRSGCTYPEKPDFN 345          
BLAST of CN184688 vs. ExPASy Swiss-Prot
Match: ADK1_ARATH (Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.349e-35
Identity = 71/82 (86.59%), Postives = 76/82 (92.68%), Query Frame = -2
Query:  204 ITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 449
            ITQGADPVVVAEDGKVK +PVI LPKEKLVDTNGAGDAFVGGFLSQLV  K +E+CVRAGCYA+NVVIQRSGCTYP KP+FN
Sbjct:  263 ITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFLSQLVHGKGIEECVRAGCYASNVVIQRSGCTYPEKPDFN 344          
BLAST of CN184688 vs. ExPASy Swiss-Prot
Match: ADK_PHYPA (Adenosine kinase OS=Physcomitrella patens GN=ADK PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.647e-28
Identity = 59/81 (72.84%), Postives = 66/81 (81.48%), Query Frame = -2
Query:  207 ITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEF 449
            ITQG DP +VAEDGKV  FPV  +PKEKLVDTN AGD+FVGGFLSQLV  K +  CVRAG YAA+V+IQRSGCT+P KP F
Sbjct:  260 ITQGTDPTIVAEDGKVTEFPVTPIPKEKLVDTNAAGDSFVGGFLSQLVLGKDIAQCVRAGNYAASVIIQRSGCTFPSKPSF 340          
BLAST of CN184688 vs. ExPASy Swiss-Prot
Match: ADK_MOUSE (Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 5.317e-24
Identity = 48/85 (56.47%), Postives = 68/85 (80.00%), Query Frame = -2
Query:  204 SLFITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 458
            ++  TQG D  +VA +  V  FPV+   +E+++DTNGAGDAFVGGFLSQLV +KP+ +C+RAG YAA+V+I+R+GCT+P KP+F+
Sbjct:  277 TVIFTQGRDDTIVAAENDVTAFPVLDQNQEEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361          
BLAST of CN184688 vs. ExPASy Swiss-Prot
Match: ADK_RAT (Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 1.547e-23
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = -2
Query:  204 SLFITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 458
            ++  TQG D  +VA    V  FPV+   +E++VDTNGAGDAFVGGFLSQLV  KP+ +C+RAG YAA+V+I+R+GCT+P KP+F+
Sbjct:  277 TVIFTQGRDDTIVATGNDVTAFPVLDQNQEEIVDTNGAGDAFVGGFLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361          
BLAST of CN184688 vs. ExPASy Swiss-Prot
Match: ADK_CRIGR (Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.710e-22
Identity = 47/85 (55.29%), Postives = 67/85 (78.82%), Query Frame = -2
Query:  204 SLFITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 458
            ++  TQG D  VVA + +V  F V+   +++++DTNGAGDAFVGGFLSQLV  KP+ +C+RAG YAA+V+I+R+GCT+P KP+F+
Sbjct:  277 TVVFTQGRDDTVVATENEVMAFAVLDQNQKEIIDTNGAGDAFVGGFLSQLVYNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361          
BLAST of CN184688 vs. ExPASy Swiss-Prot
Match: ADK_HUMAN (Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.234e-22
Identity = 44/84 (52.38%), Postives = 67/84 (79.76%), Query Frame = -2
Query:  204 LFITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 455
            +  TQG D  ++A + +V  F V+   +++++DTNGAGDAFVGGFLSQLV +KP+ +C+RAG YAA+++I+R+GCT+P KP+F+
Sbjct:  279 VIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 362          
BLAST of CN184688 vs. ExPASy Swiss-Prot
Match: ADK_SCHPO (Adenosine kinase OS=Schizosaccharomyces pombe GN=ado1 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.476e-13
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = -2
Query:  207 ITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYP-PKPEF 449
            ITQGAD  +VA+DGKV  +    +P E++VDTNGAGDAF GGF++ L Q + ++  V  G +     I+ SG T P PK +F
Sbjct:  256 ITQGADATIVAKDGKVTTYKPNRVPSEEIVDTNGAGDAFAGGFIAALSQGQGIDYAVTLGHWLGQECIKVSGTTLPLPKKQF 337          
The following BLAST results are available for this feature:
BLAST of CN184688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
ADK2_ARATH4.636e-3685.37Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2... [more]
ADK1_ARATH1.349e-3586.59Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1... [more]
ADK_PHYPA4.647e-2872.84Adenosine kinase OS=Physcomitrella patens GN=ADK P... [more]
ADK_MOUSE5.317e-2456.47Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2[more]
ADK_RAT1.547e-2357.65Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 ... [more]
ADK_CRIGR1.710e-2255.29Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1... [more]
ADK_HUMAN2.234e-2252.38Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2[more]
ADK_SCHPO2.476e-1347.56Adenosine kinase OS=Schizosaccharomyces pombe GN=a... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005O09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184688 ID=CN184688; Name=CN184688; organism=Citrus sinensis; type=EST; length=492bp
GAAAATCCATTCCCTCTGTAAGTAAATGTCATGTATTCTTATCCACATGG
TGGACAGAGTATCACAAACAAATTCAACATTGAAATAACTCCTTGATTAA
ATAATACAGGCCCCTTAATCAAGTTTGAAAAATGAAGAAACAGCGGAAGA
AAACTGACAATAGCAGAGGCCGCAAGAGATTCTTGCAATGAGGAATCAGC
CTAATTGAATTCAGGTTTTGGGGGGTAAGTGCAGCCTGACCTTTGGATTA
CAACATTTGCCGCATAGCAACCAGCTCTCACACAATCTTCCACTGGCTTC
TCTTGAACCAACTGTGACAAAAATCCTCCGACAAATGCATCCCCTGCTCC
ATTAGTATCAACCAATTTTTCCTTGGGTAGCAAGATCACAGGGAATAATT
TCACCTTCCCATCTTCAGCAACCACAACAGGGTCAGCACCTTGGGTGATA
AACAGTGATCCTCTTGTGTGTTCCCTGATGCCTTGGGCCACT
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