CN184683

Overview
NameCN184683
Unique NameCN184683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length335
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:16..349. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.979e-25
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G Q GLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLSSKPFF  L+EYI SGPVVA
Sbjct:   10 PDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVA 72

HSP 2 Score: 30.4166 bits (67), Expect = 1.979e-25
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 3 
Query:  117 MEQTFIMIKPDGV 155
            MEQTFIMIKPDGV
Sbjct:    1 MEQTFIMIKPDGV 13
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.979e-25
Identity = 51/63 (80.95%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G QRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVV+
Sbjct:   10 PDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVS 72

HSP 2 Score: 30.8018 bits (68), Expect = 1.979e-25
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 
Query:  117 MEQTFIMIKPDGVPK 161
            MEQTFIMIKPDGV +
Sbjct:    1 MEQTFIMIKPDGVQR 15
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.979e-25
Identity = 51/63 (80.95%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G QRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L++YI SGPVVA
Sbjct:   10 PDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVA 72

HSP 2 Score: 30.8018 bits (68), Expect = 1.979e-25
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 
Query:  117 MEQTFIMIKPDGVPK 161
            MEQTFIMIKPDGV +
Sbjct:    1 MEQTFIMIKPDGVQR 15
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.353e-25
Identity = 50/63 (79.37%), Postives = 53/63 (84.13%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G QRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVA
Sbjct:   10 PDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVA 72

HSP 2 Score: 30.8018 bits (68), Expect = 3.353e-25
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 
Query:  117 MEQTFIMIKPDGVPK 161
            MEQTFIMIKPDGV +
Sbjct:    1 MEQTFIMIKPDGVQR 15
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.353e-25
Identity = 50/63 (79.37%), Postives = 53/63 (84.13%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G QRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVA
Sbjct:   10 PDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVA 72

HSP 2 Score: 30.8018 bits (68), Expect = 3.353e-25
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 
Query:  117 MEQTFIMIKPDGVPK 161
            MEQTFIMIKPDGV +
Sbjct:    1 MEQTFIMIKPDGVQR 15
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.364e-25
Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G QRGL+GEII RFEKKGF LKGLKL+TVDRPFAEKHY DLS+KPFF  L++YI SGPVVA
Sbjct:   11 PDGVQRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVA 73

HSP 2 Score: 28.8758 bits (63), Expect = 4.364e-25
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3 
Query:  120 EQTFIMIKPDGVPK 161
            EQTFIMIKPDGV +
Sbjct:    3 EQTFIMIKPDGVQR 16
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.680e-25
Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G QRGLVGEII RFEKKGF+LKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVA
Sbjct:   10 PDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVA 72

HSP 2 Score: 30.8018 bits (68), Expect = 5.680e-25
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 
Query:  117 MEQTFIMIKPDGVPK 161
            MEQTFIMIKPDGV +
Sbjct:    1 MEQTFIMIKPDGVQR 15
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.622e-25
Identity = 51/63 (80.95%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G QRGLVGEII RFEKKGFSLKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVA
Sbjct:   10 PDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVA 72

HSP 2 Score: 28.8758 bits (63), Expect = 9.622e-25
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 3 
Query:  117 MEQTFIMIKPDGVPK 161
            ME TFIMIKPDGV +
Sbjct:    1 MEHTFIMIKPDGVQR 15
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.121e-24
Identity = 47/63 (74.60%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G QRGL+GE+I RFEKKGF+LKGLKL++V+R FAEKHYEDLSSK FF  L++YI SGPVVA
Sbjct:   10 PDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVA 72

HSP 2 Score: 30.8018 bits (68), Expect = 2.121e-24
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 
Query:  117 MEQTFIMIKPDGVPK 161
            MEQTFIMIKPDGV +
Sbjct:    1 MEQTFIMIKPDGVQR 15
[Close]
BLAST of CN184683 vs. ExPASy Swiss-Prot
Match: NDK_SOLLC (Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.031e-23
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:  145 PMGSQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVA 333
            P G QRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVVA
Sbjct:    6 PDGVQRGLVGEIISRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVA 68

HSP 2 Score: 23.0978 bits (48), Expect = 1.031e-23
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3 
Query:  129 FIMIKPDGVPK 161
            FIMIKPDGV +
Sbjct:    1 FIMIKPDGVQR 11
The following BLAST results are available for this feature:
BLAST of CN184683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
NDKA_FLABI1.979e-2582.54Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK_CAPAN1.979e-2580.95Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_TOBAC1.979e-2580.95Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDK1_SPIOL3.353e-2579.37Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK1_MESCR3.353e-2579.37Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK1_SOYBN4.364e-2579.37Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDK_HELAN5.680e-2579.37Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDKB_FLABI9.622e-2580.95Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK1_ARATH2.121e-2474.60Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDK_SOLLC1.031e-2382.54Nucleoside diphosphate kinase (Fragment) OS=Solanu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005O05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184683 ID=CN184683; Name=CN184683; organism=Citrus sinensis; type=EST; length=335bp
GAGGGTTTCTTTACATATATACTCACTTGCAAAACGGCAAGCTCATTCTC
TCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAACAAGTTGGTTTC
TCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATCAAGCCCGATG
GGGTCCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGAAGAA
GGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTG
CTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGTTCTCTG
ATTGAGTACATTACCTCTGGTCCTGTTGTTGCTAT
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