CN184673

Overview
NameCN184673
Unique NameCN184673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.047e-33
Identity = 81/193 (41.97%), Postives = 112/193 (58.03%), Query Frame = 1
Query:   43 SKRLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIG---GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXX-LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM 609
            +++L+GKVA+             +LF ++GA +V+ADI DELGA+L   +G     Y+HCDVT E DV +AV  AV+  G+LD+MFNNA               ED + +L+VNL G   G KHAA+ M    R+G           + G ASHAY+ SK A++G   + A ELG+HGIRVNC+SP GV + +
Sbjct:   12 ARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPA-RRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPL 203          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.812e-32
Identity = 85/202 (42.08%), Postives = 117/202 (57.92%), Query Frame = 1
Query:   46 KRLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIGGR--YIHCDVTKEEDVESAVRLAVSWKG-QLDIMFNNAXXXXXXXXXXX--LNMEDVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 630
            KRL GKVA+             +LFA++GA +VIADI D  G ALA  +G +  ++ CDV+ E+DV  AV  A+S  G +LD+  NNA             L+ +  +F  +L VN  G   G+KHAA+AM   +R G           +GGL  HAY+ SK AI+GL ++ ACEL  HG+RVNC+SP GV + ML+NA+R+
Sbjct:   51 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAP-RRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQ 251          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.598e-27
Identity = 71/201 (35.32%), Postives = 108/201 (53.73%), Query Frame = 1
Query:   31 NKLSSKRLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTI-------GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXX-LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM 609
            + L S+RL+GKVAL             +LF ++GA + I D+ D+LG  +  ++          +IH DV  E+D+ +AV  AV   G LDI+ NNA             ++ + +    VN+ G    +KHAA+ MI  ++KG           +GG+  H+Y  SK A++GL RS A ELG+HGIRVNC+SP+ V +++
Sbjct:   11 SSLPSQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIP-EKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKL 210          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20
Identity = 62/192 (32.29%), Postives = 92/192 (47.92%), Query Frame = 1
Query:   52 LMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNA 621
            L GK  +             +L   +GA++ +ADI DE G A+  T GG+  Y  CD+ +EEDV++ V   ++  G LD  FNNA           +++E  +  + +N+ G    +K+   AMIE   KG           +G      Y  +K A++GL R  A + GKHGIRVN + P  V + ML  A
Sbjct:    4 LSGKTIIVTGGGSGIGRATVELLVASGANVPVADINDEAGEAVVATSGGKAAYFRCDIAQEEDVKALVAQTLAAFGGLDGSFNNAAIPQAGLPLAEVSLERFRQSMDINVTGTFLCMKYQILAMIERGTKGSIVNTASAAGVVGVPMHGEYVGAKHAVVGLTRVAAADYGKHGIRVNALVPGAVRTPMLQRA 195          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 69/191 (36.13%), Postives = 92/191 (48.17%), Query Frame = 1
Query:   43 SKRLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM 609
            S RL+GKVAL             +     GA +V  DILDE G A+A  +    RY+H DVT+     +AV  AV+  G L ++ NNA             + + + +L VNL G+  GI+   K M E  R G            G +A H Y+ +K A+ GL +STA ELG  GIRVN I P  V + M
Sbjct:    2 SGRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYA-LTEWQRILDVNLTGVFLGIRAVVKPMKEAGR-GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 69/191 (36.13%), Postives = 92/191 (48.17%), Query Frame = 1
Query:   43 SKRLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM 609
            S RL+GKVAL             +     GA +V  DILDE G A+A  +    RY+H DVT+     +AV  AV+  G L ++ NNA             + + + +L VNL G+  GI+   K M E  R G            G +A H Y+ +K A+ GL +STA ELG  GIRVN I P  V + M
Sbjct:    2 SGRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYA-LTEWQRILDVNLTGVFLGIRAVVKPMKEAGR-GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16
Identity = 61/199 (30.65%), Postives = 95/199 (47.74%), Query Frame = 1
Query:   49 RLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIGGRYIHCDVTKEE-----DVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 630
            +L GK AL             ++FA +GA++++ DI DE+   LAD +GGR   C   K +      V++AV  A   +G++DI+ NNA           ++ ED  F + +N+ G+ +  K     MI+ +              +      AY+LSK AI+GL +S A E  + GIRVN I P  V + M  +  R+
Sbjct:    3 KLTGKTALITGASQGIGEGIARVFARHGANLILLDISDEI-EKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLD-MSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQ 199          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16
Identity = 61/199 (30.65%), Postives = 95/199 (47.74%), Query Frame = 1
Query:   49 RLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIGGRYIHCDVTKEE-----DVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 630
            +L GK AL             ++FA +GA++++ DI DE+   LAD +GGR   C   K +      V++AV  A   +G++DI+ NNA           ++ ED  F + +N+ G+ +  K     MI+ +              +      AY+LSK AI+GL +S A E  + GIRVN I P  V + M  +  R+
Sbjct:    3 KLTGKTALITGASQGIGEGIARVFARHGANLILLDISDEI-EKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLD-MSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQ 199          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = 1
Query:  118 FAENGAHIVIADILDELGAALADTIGGR----YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM 609
            F   GA +V+ D+  E     A  +GG      + CDVT+ +DV+  +R AV   G LD+M NNA           +  E    +++V+L G  +G + AA  M E +++G           +G +    YS +K  I+G+ ++ A EL   GIRVN I+P  + S M
Sbjct:   27 FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDATMRT-MTEEQFDQVIAVHLKGTWNGTRLAAAIMRE-RKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAM 192          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = 1
Query:  118 FAENGAHIVIADILDELGAALADTIGGR----YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM 609
            F   GA +V+ D+  E     A  +GG      + CDVT+ +DV+  +R AV   G LD+M NNA           +  E    +++V+L G  +G + AA  M E +++G           +G +    YS +K  I+G+ ++ A EL   GIRVN I+P  + S M
Sbjct:   27 FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDATMRT-MTEEQFDQVIAVHLKGTWNGTRLAAAIMRE-RKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAM 192          
The following BLAST results are available for this feature:
BLAST of CN184673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MOMAS_ORYSJ8.047e-3341.97Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
TS2_MAIZE6.812e-3242.08Sex determination protein tasselseed-2 OS=Zea mays... [more]
ABA2_ARATH6.598e-2735.32Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
LINC_PSEPA4.580e-2032.292,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
HSD_MYCTU2.273e-1936.133-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO2.273e-1936.133-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
UCPA_SALTY3.072e-1630.65Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI3.072e-1630.65Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
Y1385_MYCBO1.427e-1331.55Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU1.427e-1331.55Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005N24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184673 ID=CN184673; Name=CN184673; organism=Citrus sinensis; type=EST; length=710bp
GAGGACGAAATGGAGGCACGTGATGACACAAACAAGTTATCTTCAAAGAG
ATTGATGGGCAAAGTTGCTTTGATAACTGGCGGAGCAAGAGGGATTGGAG
CAGCCACTGCTAAACTATTTGCGGAGAATGGTGCGCACATTGTCATAGCA
GACATTCTTGATGAACTCGGCGCTGCTCTAGCCGACACAATAGGCGGCCG
GTACATACATTGCGACGTGACAAAGGAAGAAGATGTTGAATCAGCTGTCC
GGCTTGCAGTTTCCTGGAAAGGCCAGTTAGACATAATGTTCAACAATGCT
GGAATTTCTGGCTCTGGAGGCAGCATCACAAGCCTTAACATGGAAGATGT
GAAGTTTCTTCTCTCAGTTAATCTGAATGGCATATTACATGGAATCAAGC
ATGCGGCGAAGGCCATGATCGAAGGCCAGAGAAAAGGCAGTATTATCTGC
AGTTCTAGCTCTGCAGCCATCATGGGCGGCCTTGCATCCCATGCCTATTC
GTTGTCAAAAGAGGCAATCATTGGCTTGGCAAGAAGCACAGCCTGCGAGC
TGGGCAAGCATGGAATTCGAGTGAACTGCATCTCGCCTCATGGAGTTCCT
TCAGAGATGCTTGTGAATGCCTACAGAAAGTACCTGGGGAAAAGCTGATA
TGAAACCTGAAGAAGTGAGCAAGATGGTGGGAGAGAGTGGAAGTTTGCTG
CGTGGGAGGA
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