CN184659

Overview
NameCN184659
Unique NameCN184659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 8.599e-31
Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = -1
Query:  254 QVSGSLAPCIGFLRSGGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 514
            QV+ SLAPCIG++RSGG +P  CCNG+R+ N  ARTT DRQTACNCLK  A SI  +N NNAAGLPG CGV++PYKISTST+C+ V+
Sbjct:   29 QVTSSLAPCIGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.123e-30
Identity = 62/87 (71.26%), Postives = 68/87 (78.16%), Query Frame = -1
Query:  254 QVSGSLAPCIGFLRSGGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 514
            QVS SLAPCI +LR+GG +P  CCNGVRS N AA+TT DRQ ACNCLK A  SI  LNLN AAGLPG CGVS+PYKIS STDC  V+
Sbjct:    5 QVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91          
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 7.280e-30
Identity = 58/87 (66.67%), Postives = 70/87 (80.46%), Query Frame = -1
Query:  254 QVSGSLAPCIGFLRSGGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 514
            QVS SLAPCIG++R GG +P  CCNG+R+ N  ARTTPDR+TACNCLKQ + SI  +N NNAA LPG CGV+IPYKIS ST+C+ V+
Sbjct:    5 QVSSSLAPCIGYVRGGGAVPPACCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCATVK 91          
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.613e-29
Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = -1
Query:  254 QVSGSLAPCIGFLRSGGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 514
            QVS +LAPCI ++R GG +P  CCNG+R+ N  ARTTPDRQ ACNCLKQ + S+P +N NNAA LPG CGV IPYKIS ST+C+ V+
Sbjct:    5 QVSSALAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91          
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.719e-29
Identity = 54/87 (62.07%), Postives = 69/87 (79.31%), Query Frame = -1
Query:  254 QVSGSLAPCIGFLRSGGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 514
            QVS +LAPCI ++R GG +P  CCNG+R+ N  A+TT DRQTACNCLKQ + S+P +N NNAA LPG CGV++PYKIS ST+C+ V+
Sbjct:   31 QVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117          
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.163e-29
Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = -1
Query:  254 QVSGSLAPCIGFLRSGGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 514
            QVS SLAPCI +L  GG +P  CC+GV+S N+AA+TTPDRQ AC CLK A  SI  +N  NAA  PG CGVSIPYKIS STDCSKV+
Sbjct:   30 QVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116          
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.163e-29
Identity = 55/87 (63.22%), Postives = 69/87 (79.31%), Query Frame = -1
Query:  254 QVSGSLAPCIGFLRSGGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 514
            QVS +LAPCI ++R GG +P  CCNG+R+ N  ARTTPDRQ ACNCLKQ + S+P +N NNAA LPG CGV+IPY+IS ST+C+ V+
Sbjct:   31 QVSSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117          
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.899e-28
Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = -1
Query:  254 QVSGSLAPCIGFLRSGGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 514
            QVS +LAPCI +++ GG +P  CCNG+R+ N  ARTT DR+ ACNCLKQ + SIP +N NNAA LPG CGV++PYKIS ST+C+ V+
Sbjct:    5 QVSSNLAPCINYVKGGGAVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91          
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.162e-27
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = -1
Query:  254 QVSGSLAPCIGFLRSGGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 514
            QVS +LAPCI ++RSGG +P  CCNG+++ N  A+TTPDRQ ACNCLK  A S+  +N  NA  LPG CGV++PYKISTST+C+ V+
Sbjct:   29 QVSANLAPCINYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of CN184659 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 9.839e-27
Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = -1
Query:  257 QVSGSLAPCIGFLRS--GGPIPMPCCNGVRSFNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 514
            QV+G+LAPC+G+LRS    P+P+ CCN VR  N AARTT D++TAC CLKQ A ++  LNLN AAGLP  CGV+IPYKIS +TDC++V
Sbjct:   32 QVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119          
The following BLAST results are available for this feature:
BLAST of CN184659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
NLTP_MALDO8.599e-3167.82Non-specific lipid-transfer protein OS=Malus domes... [more]
LTP1_MORNI1.123e-3071.26Non-specific lipid-transfer protein 1 OS=Morus nig... [more]
NLTP1_PRUAR7.280e-3066.67Non-specific lipid-transfer protein 1 OS=Prunus ar... [more]
NLTP1_PRUPE3.613e-2964.37Non-specific lipid-transfer protein 1 OS=Prunus pe... [more]
NLTP_PRUAV4.719e-2962.07Non-specific lipid-transfer protein OS=Prunus aviu... [more]
NLTP_HELAN6.163e-2966.67Non-specific lipid-transfer protein OS=Helianthus ... [more]
NLTP1_PRUDU6.163e-2963.22Non-specific lipid-transfer protein 1 OS=Prunus du... [more]
NLTP1_PRUDO8.899e-2860.92Non-specific lipid-transfer protein 1 OS=Prunus do... [more]
NLTP_PYRCO1.162e-2759.77Non-specific lipid-transfer protein OS=Pyrus commu... [more]
NLTP_DAUCA9.839e-2762.50Non-specific lipid-transfer protein OS=Daucus caro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184659 ID=CN184659; Name=CN184659; organism=Citrus sinensis; type=EST; length=514bp
TTTTTCCTTTTTTTTTTTTTTTAAACTGAACACAAGGCAAGATTTCCTTT
AATAAACAGAATAGACACAAACTGACGATGACATGAAAAGCAAAGACAAT
AAAACATAACATGAAACGAGGGCGCGAACGAGACTCGCAGTACAAAGTGT
AGAGAGAGACTCATAAATCGGACACAAAAATGTCCTTATTATTATACATT
TATTCTACTCCGTCAACTTAAACCTGAAAATCAACGGCCCAGATTCCTGT
TCACCTGACCTTAGAGCAGTCAGTGGAGGTGCTGATCTTGTAAGGAATGC
TGACTCCACAAGCTCCTGGAAGACCAGCAGCATTATTAAGGTTGAGGCTA
GGGATTGATCTGGCGGCTTGCTTCAAGCAGTTGCATGCAGTTTGGCGGTC
AGGTGTGGTTCTGGCGGCAGCGTTGAAAGACCTGACGCCGTTGCAGCATG
GCATAGGTATAGGGCCGCCCGATCTCAAGAAACCGATGCATGGTGCCAAT
GAACCACTCACCTG
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