CN184586

Overview
NameCN184586
Unique NameCN184586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184586 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.038e-11
Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = -1 
Query:  201 VHFKDVALAHILVYENPSACGRHLCVEAISHYGDFAAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKLMDLGLQF-IPMDQIIKDSVESLKAKGFI 488
            VH  D+ ++HI +YENP A GR++     +   D A  + E YPEY++P   KD +  + + +  +KKL DLG +F   +  +   +VES +AKG +
Sbjct:  245 VHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKEDMGQVQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLL 341
The following BLAST results are available for this feature:
BLAST of CN184586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DFRA_DIACA4.038e-1136.08Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005L23_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184586 ID=CN184586; Name=CN184586; organism=Citrus sinensis; type=EST; length=554bp
AAGAGGAGTCTAGAAAGAATTTTATTTATTAAGTTGTCGACTTCCTGACA
GTGGCTCATCTCAACGATATTTCACAGAAAATTACAAAGAGACAACATTT
AACTAAATTATCTAATTATACTATAGCTCTCAGCCCTCTGCTTGTATAAA
GCGGATGGGTTCATCAGCAGCTGCTGACACGTTGCAGCTTTCACTCAAGA
GATAAATCCCTTGGCCTTCAAACTCTCGACAGAGTCCTTGATGATTTGAT
CCATGGGAATGAATTGTAAACCCAAGTCCATTAGCTTTTTGGCTCCATCC
TTGGTCCTCAATAACCCAGGTTGGGTGTCTTTTGGCAGTCTTGGAATGTC
ATATTCAGGGTAAAGTTCTGCGACCTTGGCCGCAAAGTCACCATAATGAG
ATATTGCTTCTACACACAGATGCCTTCCACATGCTGATGGGTTCTCATAC
ACCAAAATATGTGCCAAGGCCACATCTTTAAAGTGGACCGATCCCATAAA
GAAGTTCTCATATGTATCAGTGCAACCCTGGAGAAGCCGCAGAAACATCA
ACAT
back to top