DC887397

Overview
NameDC887397
Unique NameDC887397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3018 contig Csv1_Contig3018:16..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 6.237e-81
Identity = 145/168 (86.31%), Postives = 159/168 (94.64%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVDLNPSRFN+AKKFGVTEFVNPKD+ DKPVQQVIA+MT+GGVDRSVECTG+V AMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP+SD+PSVV+KYM KELE+EKFITH VPFSEINKAFD ML GESIRC+I M+
Sbjct:  214 EGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGESIRCMITME 381          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 4.470e-79
Identity = 139/167 (83.23%), Postives = 155/167 (92.81%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVDLN SRF +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHPMNLLNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  213 EGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.625e-79
Identity = 141/167 (84.43%), Postives = 155/167 (92.81%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  +SGASRIIGVDL  SRF  AKKFGV EFVNPK++DKPVQQVIA+MTNGGVDR+VECTGS+QAMISAFECVHDGWGVAVLVGVP+KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVEKYM  ELE+EKFITHTVPFSEINKAFD ML GESIRCII+M+
Sbjct:  213 EGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKME 379          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 293.893 bits (751), Expect = 7.625e-79
Identity = 139/166 (83.73%), Postives = 154/166 (92.77%), Query Frame = -1
Query:  352 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 849
            +G  ++GASRIIGVD N  RF++AK+FGVTE VNPKD+DKP+QQVIA+MT+GGVDRSVECTGSVQAMI AFECVHDGWGVAVLVGVP+KDDAFKTHPMN LNERTLKGTFFGNYKP++D+P VVEKYMNKELE+EKFITHTVPFSEINKAFD ML GESIRCII M
Sbjct:  212 EGARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESIRCIITM 377          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.301e-78
Identity = 138/167 (82.63%), Postives = 154/167 (92.22%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVDLN SRF +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  213 EGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.301e-78
Identity = 138/167 (82.63%), Postives = 154/167 (92.22%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVDLN SRF +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  213 EGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.897e-78
Identity = 138/167 (82.63%), Postives = 153/167 (91.62%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVDLNPSRF EAKKFG TEFVNPKD++KPVQ+V+ADMTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KELEVEKFITH+VPFSEINKAFDLM  GE IRCIIRM+
Sbjct:  212 EGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVNPKDHNKPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINKAFDLMAKGEGIRCIIRME 378          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.101e-77
Identity = 139/167 (83.23%), Postives = 154/167 (92.22%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  +SGASRIIGVDL  SRF  AKKFGV EFVNPKD+DKPVQQVIA+MT+GGVDR+VECTGS+QAMISAFECVHDGWGVAVLVGVP KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVE+YM  ELE+EKFITH++PFSEINKAFD ML GESIRCIIRM+
Sbjct:  213 EGARMSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYMLKGESIRCIIRME 379          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.438e-77
Identity = 136/167 (81.44%), Postives = 153/167 (91.62%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVDLNPSRF EA+KFG TEFVNPKD++KPVQ+V+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPF+EINKAFDLM  GE IRCIIRM+
Sbjct:  212 EGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLMAKGEGIRCIIRME 378          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 1.878e-77
Identity = 136/166 (81.93%), Postives = 152/166 (91.57%), Query Frame = -1
Query:  352 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 849
            +G  ++GASRIIGVDLN SRF +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHP+N LNERTLKGTFFGNYKPRSD+P VVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M
Sbjct:  213 EGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITM 378          
The following BLAST results are available for this feature:
BLAST of DC887397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1_PETHY6.237e-8186.31Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_SOLTU4.470e-7983.23Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1_PEA7.625e-7984.43Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_ARATH7.625e-7983.73Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH3_SOLTU1.301e-7882.63Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU1.301e-7882.63Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_PENAM2.897e-7882.63Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_TRIRP1.101e-7783.23Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_MAIZE1.438e-7781.44Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH2_SOLLC1.878e-7781.93Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]

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Properties
Property NameValue
Genbank descriptionDC887397 EIC Citrus sinensis cDNA clone EIC0315 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887397 ID=DC887397; Name=DC887397; organism=Citrus sinensis; type=EST; length=849bp
GACTGGCGTAATTACCATATCATTAACACTGCAACGGCGTATAAGAAAGA
AGATTTACACGAAAATCTTTATTACATAAGCTACAAAAAGAAGTACTGTA
AGAAATAGGTAGAAAACACACCTCTTTGTACGCCATATGCAGCAAGTCAT
CAAACAGAAAAACAAAACAAAAAAAGGGACTGTAAGAAATATGTAGAAAA
CACAACTCTTTGAAAGCCATTCGCAGCAAGTCATCAAACATACAGCATAA
ATTACTTATTCTCGGGGTAATATATAACTTGGAAAATTATGTGATCATCT
TCATTCTGCCTCCATTAGATTGATCAGCAACAGCAGACACATCTAACCAT
CCATGCGAATGATGCACCTAATGCTTTCTCCCGCAAGCATGAGGTCAAAT
GCCTTGTTTATCTCCGAGAAGGGCACAGTGTGAGTGATGAATTTTTCGAC
CTCCAACTCCTTGTTCATGTATTTTTCAACAACAGAAGGAAGATCAGAGC
GAGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAGAGTCCTCTCATTAAGC
AGATTCATGGGATGAGTCTTGAATGCATCATCTTTGTTTGGCACACCCAC
AAGCACAGCAACACCCCAACCATCGTGAACGCATTCAAATGCTGAAATCA
TGGCCTGGACGCTTCCAGTACATTCAACACTTCTATCCACTCCACCATTG
GTCATGTCAGCAATCACCTGTTGAACAGGTTTGTCATAATCTTTTGGATT
CACAAACTCGGTAACCCCAAACTTCTTGGCTTCATTGAATCTGCTTGGGT
TCAAATCAACACCAATGATCCTGGAAGCCCCTGATACCCCTTGCCCCTT
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