CN184547

Overview
NameCN184547
Unique NameCN184547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.873e-49
Identity = 88/103 (85.44%), Postives = 97/103 (94.17%), Query Frame = -2
Query:  276 CGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 584
            CGLDNV+MSWGHDDYMYLVAKEN+TTLPSA LFIIRYHSFYALHKSEAYKHLMN ED EN+KWL+ F+KYDLYSKSKVR++VE+VKPYYLSL  KYFP+KLKW
Sbjct:  209 CGLDNVLMSWGHDDYMYLVAKENQTTLPSAGLFIIRYHSFYALHKSEAYKHLMNNEDRENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTNKYFPSKLKW 311          
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.586e-48
Identity = 88/103 (85.44%), Postives = 93/103 (90.29%), Query Frame = -2
Query:  276 CGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 584
            CGLDNV+MSWGHDDYMYLVAKENKTTLPSA LFIIRYHSFY LHK  AY HLMN+ED ENLKWL  F+KYDLYSKS  RIDVEKVKPYY+SLIEKYFPAKL+W
Sbjct:  206 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYMHLMNDEDKENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEKYFPAKLRW 308          
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.641e-45
Identity = 82/103 (79.61%), Postives = 92/103 (89.32%), Query Frame = -2
Query:  276 CGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 584
            CGLDNV+MSWGHDDYMYLVAK+N TTLP A LFIIRYHSFY LHK+ AY HLMN+ED ++LKWL  F+KYDLYSKSKV +DVE+VKPYY+SLI KYFPAKLKW
Sbjct:  215 CGLDNVLMSWGHDDYMYLVAKKNGTTLPHAGLFIIRYHSFYPLHKAGAYTHLMNDEDRDDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYISLINKYFPAKLKW 317          
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.656e-45
Identity = 81/103 (78.64%), Postives = 91/103 (88.35%), Query Frame = -2
Query:  276 CGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 584
            CGL+NV+MSWGHDDYMYLVAKEN +TLPS  LFIIRYHSFY LHK+ AY HLMNEED ENLKWL  F+KYDLYSKSKV ++VEKVKPYY+SLI+KYFP  L+W
Sbjct:  212 CGLENVLMSWGHDDYMYLVAKENGSTLPSPGLFIIRYHSFYPLHKAGAYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIKKYFPENLRW 314          
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.389e-44
Identity = 81/103 (78.64%), Postives = 89/103 (86.41%), Query Frame = -2
Query:  276 CGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 584
            CGL+NVMMSWGHDDYMYLVAKEN +TLPSA  FIIRYHSFY LH +  Y HLMNEED ENLKWL  F+KYDLYSKSKV +DVEKVKPYY+SLI+KYFP  L+W
Sbjct:  215 CGLNNVMMSWGHDDYMYLVAKENGSTLPSAGQFIIRYHSFYPLHTAGEYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIKKYFPENLRW 317          
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX_DICDI (Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.142e-30
Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = -2
Query:  276 GLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 581
            GL+NV MSWGHD+Y YLV   NK  LP  +L++IR+HSFY  H+   Y HL NEED + L W++ F+K+DLYSK    +DVE +KPYY SLI KYFP +L W
Sbjct:  191 GLENVTMSWGHDEYFYLVCVGNKCLLPKESLYMIRFHSFYPWHRHNKYTHLTNEEDEKMLNWVKEFNKFDLYSKDSEPVDVESLKPYYQSLISKYFPNELHW 292          
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX_DANRE (Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.947e-30
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = -2
Query:  276 CGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 584
            CGLD V+MSWGHD+Y+Y V K NK T+P   L++IR+HSFY  H +  Y HL NE+D + L W++ F+K+DLY+KS    DVE++KPYY SLI+KY P  L+W
Sbjct:  176 CGLDKVLMSWGHDEYLYRVMKFNKCTIPEEGLYMIRFHSFYPWHSNGDYMHLCNEKDQQMLPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVLQW 278          
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX_BOVIN (Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28
Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = -2
Query:  276 CGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 584
            CGL+NV+MSWGHD+YMY + K NK  LP  A +IIR+HSFY  HK   Y+ L NE+D+  L W++ F+K+DLY+KS    DV  ++PYY  L++KY P  L W
Sbjct:  183 CGLENVLMSWGHDEYMYRMMKFNKFALPPEAFYIIRFHSFYPWHKFGDYQQLCNEQDLAMLPWVQEFNKFDLYTKSSSLPDVAALRPYYQGLVDKYCPGILCW 285          
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX_PIG (Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27
Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = -2
Query:  276 CGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 584
            CGL+N +MSWGHD+YMY + K NK +LP  A +IIR+HSFY  H    Y+ L NE+D+  L W++ F+K+DLY+K     DV++++PYY  LI+KY P  L W
Sbjct:  180 CGLENALMSWGHDEYMYQMMKFNKFSLPGEAFYIIRFHSFYPWHTGGDYRQLCNEQDLAMLPWVQEFNKFDLYTKGSDMPDVDELRPYYQGLIDKYCPGVLCW 282          
BLAST of CN184547 vs. ExPASy Swiss-Prot
Match: MIOX_MOUSE (Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27
Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = -2
Query:  276 CGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 584
            CGL+NV+MSWGHD+Y+Y + K NK +LPS A ++IR+HSFY  H    Y+ L +++D++ L W++ F+K+DLY+K     DVE ++PYY  LI+KY P  L W
Sbjct:  183 CGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMIRFHSFYPWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPDVESLRPYYQGLIDKYCPGTLSW 285          
The following BLAST results are available for this feature:
BLAST of CN184547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX1_ARATH1.873e-4985.44Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_ORYSJ1.586e-4885.44Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX2_ARATH1.641e-4579.61Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX5_ARATH3.656e-4578.64Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
MIOX4_ARATH1.389e-4478.64Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_DICDI1.142e-3056.86Inositol oxygenase OS=Dictyostelium discoideum GN=... [more]
MIOX_DANRE1.947e-3055.34Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=... [more]
MIOX_BOVIN9.046e-2852.43Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1[more]
MIOX_PIG1.543e-2750.49Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1[more]
MIOX_MOUSE1.543e-2749.51Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184547 ID=CN184547; Name=CN184547; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTGCAGGAGACTAACAAATAGAACTCTTTTATTAG
AAACAAACAGATACCAAATGCATCTTACACAAACCATAAAATGCAACATT
ATTATTTTTTCTTACAAGAACTTCAAACTAGATAGATTAGCCATTTAACA
AAGCAACTATGATGACCTCTCAAAAACTAATTCATCATCATATTCATTAG
CTAACTTCGCTGTCTGCTGACCACATCAGTACCCATATTGAGCCATCGCC
AGTTTCAGAAAACTCTCGAGTCTCACCATTTTAGCTTCGCCGGGAAATAC
TTTTCAATGAGGGAGAGATAGTAAGGCTTGACCTTTTCCACATCTATCCG
GACTTTGCTCTTGCTATAAAGGTCATATTTGCTGAATGTTTCAAGCCACT
TCAGATTTTCTACATCCTCCTCGTTCATTAAGTGTTTGTATGCTTCTGAT
TTGTGCAGCGCATAGAATGAGTGGTATCTAATGATGAAAAGAGCTGCTGA
AGGCAGAGTTGTTTTGTTTTCCTTGGCCACCAAGTACATGTAGTCATCGT
GCCCCCACGACATCATTACATTGTCCAATCCGCAT
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