CN184546

Overview
NameCN184546
Unique NameCN184546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.795e-77
Identity = 144/187 (77.01%), Postives = 151/187 (80.75%), Query Frame = 1
Query:   73 MTILID----QPHFGVEVQEKKV---PIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIGHHKYF 612
            MTILID    Q   G E+ EK       +E EL LD GF  P TNSFG TFRDYDAE ER+ GVE FYR+NHI QT DFV+KMREEY KLNR EMSIWECCELLN+ +DESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVL   SFG LPQWAVVGDTFPVGCAFDESI HHKYF
Sbjct:    1 MTILIDRHSDQNDAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGDTFPVGCAFDESIVHHKYF 187          
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 1.204e-73
Identity = 138/194 (71.13%), Postives = 157/194 (80.93%), Query Frame = 1
Query:   73 MTILIDQPHFGVEVQEKKVPIDEK--ELSLDGGFLVPQT-----------NSFGHTFRDYD-AEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIGHHKYF 612
            MTIL++       V EKKV I+E+  EL LDGGF+VP++           N  GH+FRDY+  E ERQ+GVE FYR+ HI+QTYDFVKKMR+EYGKLN++EMSIWECCELLN+VVDESDPDLDEPQI+HLLQTAEAIR+DYPDEDWLHLT LIHDLGKVL LP FGGLPQWAVVGDTFPVGC FD +  HHKYF
Sbjct:    1 MTILVEHFVPDSRVDEKKV-IEERDNELVLDGGFVVPKSKETDAFDAPDMNFLGHSFRDYENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDPDLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGDTFPVGCTFDSANIHHKYF 193          
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 3.503e-73
Identity = 133/193 (68.91%), Postives = 150/193 (77.72%), Query Frame = 1
Query:   73 MTILIDQPHFGVEVQEKKVPIDEKELSLDGGF-------------LVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIGHHKYF 612
            MTI +++P F      +K   +  EL LDGGF             L P+ N+FG  FRDYD E ERQ+GVE FYR+ HINQT DFVKKMR EYGKL+++ MSIWECCELLN+VVDESDPDLDEPQI+HLLQ+AEAIRKDYP+EDWLHLT LIHDLGKV+ LP FGGLPQWAVVGDTFPVGCAFDES  HHKYF
Sbjct:    1 MTISVEKPIFEEVSAFEKSGDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRDYDVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYF 193          
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 3.873e-72
Identity = 128/185 (69.19%), Postives = 152/185 (82.16%), Query Frame = 1
Query:   73 MTILIDQPHFGVEVQEKKVP-----IDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIGHHKYF 612
            MTI I+QPH    + ++KV       +  EL LDGGF+VP +N+FG+ FR+Y+AE ER+E VE FYR+NHINQTYDFV++MREEYG++++ EM IWEC ELLN+ +D+SDPDLD PQIEHLLQTAEAIRKD+PDEDWLHLTGLIHDLGKVL  PSFG LPQW+VVGDTFPVGCAFDE   H KYF
Sbjct:    1 MTITIEQPHLDA-IADRKVAGGGGGDNAAELVLDGGFVVPDSNAFGNAFRNYEAESERKETVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQIEHLLQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQWSVVGDTFPVGCAFDECNVHFKYF 184          
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.688e-65
Identity = 124/193 (64.25%), Postives = 139/193 (72.02%), Query Frame = 1
Query:   73 MTILIDQPHFGVEVQEKKVPIDEKELSLDGG------------FLVPQTNSFGHTFRDY-DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIGHHKYF 612
            M I ++ P F   V E        EL LD              FL P+ N+FG  FRDY D   ERQ+ VE+FY   H NQT DFV+KMR EYGKL+++ M+IWECCEL  +VVDESDPDLDEPQI+HLLQ+AEAIRKDYP+EDWLHLT LIHDLGKVL LP FGGLPQWAVVGDTFPVGCAFDES  HHKYF
Sbjct:    1 MNISVENPVF---VHEDSTTQKTGELRLDSDIPMSKISSDDEVFLAPEMNAFGRQFRDYTDTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMVMNIWECCELSKEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLTLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYF 190          
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX_DICDI (Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.622e-36
Identity = 75/140 (53.57%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  202 FRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNR-VEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDE--DWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIGHHKYF 612
            FR+Y+   +R   V   YR +H  QTYD+  + +++Y +L+  ++M +WE  ELLN ++DESDPD + PQI H LQTAEAIRK YPD   DW HLTG IHDLGKVL    F   PQWA VGDTFP+GC FDES   +++F
Sbjct:   32 FRNYENSEDR---VSEAYRNSHTYQTYDYATEKKKQYSQLDTSIKMGLWEAAELLNTIIDESDPDSNIPQINHCLQTAEAIRKVYPDSKYDWFHLTGFIHDLGKVLLSKKFKEQPQWATVGDTFPLGCKFDESNIFYEFF 168          
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX_MOUSE (Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.539e-31
Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = 1
Query:  175 PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESI 594
            P+      +FR+Y + G   + V   Y++ H +QT DFV + R +YG  +  +M+I E   +L+D+VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGK++ L    G PQWAVVGDTFPVGC    S+
Sbjct:   19 PEMAKSKDSFRNYTS-GPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL---WGEPQWAVVGDTFPVGCRPQASV 154          
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX_RAT (Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.317e-31
Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 1
Query:  199 TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESI 594
            +FR+Y + G   + V   Y++ H +QT DFV + R ++G  +  +M++ E  ++L+D+VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGK+L L    G PQWAVVGDTFPVGC    S+
Sbjct:   27 SFRNYTS-GPLLDRVFTTYKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAVDMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL---WGEPQWAVVGDTFPVGCRPQASV 154          
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX_PONAB (Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.667e-30
Identity = 66/132 (50.00%), Postives = 88/132 (66.67%), Query Frame = 1
Query:  199 TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESI 594
            +FR+Y + G   + V   Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGKVL L    G PQWAVVGDTFPVGC    S+
Sbjct:   27 SFRNYTS-GPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---FGEPQWAVVGDTFPVGCRPQASV 154          
BLAST of CN184546 vs. ExPASy Swiss-Prot
Match: MIOX_HUMAN (Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.667e-30
Identity = 66/132 (50.00%), Postives = 88/132 (66.67%), Query Frame = 1
Query:  199 TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESI 594
            +FR+Y + G   + V   Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGKVL L    G PQWAVVGDTFPVGC    S+
Sbjct:   27 SFRNYTS-GPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---FGEPQWAVVGDTFPVGCRPQASV 154          
The following BLAST results are available for this feature:
BLAST of CN184546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX1_ARATH1.795e-7777.01Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX2_ARATH1.204e-7371.13Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX4_ARATH3.503e-7368.91Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_ORYSJ3.873e-7269.19Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX5_ARATH2.688e-6564.25Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_DICDI2.622e-3653.57Inositol oxygenase OS=Dictyostelium discoideum GN=... [more]
MIOX_MOUSE2.539e-3148.57Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV... [more]
MIOX_RAT3.317e-3150.00Inositol oxygenase OS=Rattus norvegicus GN=Miox PE... [more]
MIOX_PONAB3.667e-3050.00Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV... [more]
MIOX_HUMAN3.667e-3050.00Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K23_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184546 ID=CN184546; Name=CN184546; organism=Citrus sinensis; type=EST; length=613bp
CCTAAATTTCTTGCATTTTGTTTTTTTGCTTCTCTTTCTTGAGACCGTGA
GCTTTTGGTACTTTGATTCAGGATGACTATCCTCATTGATCAGCCTCACT
TTGGAGTTGAGGTACAGGAAAAGAAGGTCCCTATTGATGAGAAAGAACTG
TCGTTAGACGGTGGATTTCTGGTGCCACAGACCAACTCATTTGGCCACAC
CTTTAGGGATTATGATGCTGAAGGTGAAAGGCAAGAAGGAGTGGAGAATT
TCTACAGAATCAATCACATTAATCAGACATATGACTTTGTGAAGAAGATG
AGGGAGGAGTATGGCAAATTAAACAGAGTGGAAATGAGCATTTGGGAATG
CTGTGAACTTCTGAATGATGTGGTGGATGAGAGCGATCCAGACCTGGATG
AACCTCAAATTGAGCACCTGCTGCAGACTGCCGAAGCTATCAGAAAGGAC
TATCCTGATGAAGATTGGCTTCACTTGACTGGCCTTATCCATGATCTTGG
TAAGGTGCTAAATCTTCCTAGCTTTGGAGGGCTTCCTCAATGGGCAGTAG
TTGGTGACACTTTCCCTGTTGGCTGTGCTTTCGATGAATCCATCGGTCAT
CACAAGTATTTTA
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