EY666424

Overview
NameEY666424
Unique NameEY666424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDA19_ARATH (Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2)

HSP 1 Score: 434.876 bits (1117), Expect = 2.580e-121
Identity = 205/228 (89.91%), Postives = 216/228 (94.74%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            FHADDYVSFLRSITPETQQDQ+RQLKRFNVGEDCPVFDGL+SFCQTYAGGSVGG+VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY TDRVMTVSFHKFGDYFPGTG I+DIGY  GK+YSLNVPLDDGIDDESYH LFKPI+GKVME+FRPGAV LQCGADSLSGDRL  F  SIKGHA+ VKF++ F+VP
Sbjct:   75 FHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVP 302
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDA19_MAIZE (Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 1.516e-113
Identity = 194/228 (85.09%), Postives = 212/228 (92.98%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            FHA++Y++FLRS+TPETQQDQ+R LKRFNVGE+CPV DGL+SFCQTYAG SVGGAVK NHG  DIAINW+GGLHHAKKCEASGFCYVNDIVLAILELLK HERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIG+SKGK+YSLNVPLDDGIDDESY  LFKPI+GKVMEVFRPGAV LQCGADSLSGDRL  F  SIKGHA+ V++++ F+VP
Sbjct:   81 FHAEEYINFLRSVTPETQQDQIRLLKRFNVGEECPVLDGLYSFCQTYAGASVGGAVKFNHGH-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVP 307
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC1_CHICK (Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 7.303e-100
Identity = 168/228 (73.68%), Postives = 194/228 (85.09%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            +H+DDY+ FLRSI P+   +  +Q++RFNVGEDCPVFDGLF FCQ  AGGSV  AVKLN    DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG  KGK+Y++N PL DGIDDESY  +FKP+I KVME F+P AV LQCG+DSLSGDRL  F  +IKGHAK V+F+K F++P
Sbjct:   67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLP 294
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC1_RAT (Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.625e-99
Identity = 166/228 (72.81%), Postives = 194/228 (85.09%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            +H+DDY+ FLRSI P+   +  +Q++RFNVGEDCPVFDGLF FCQ   GGSV  AVKLN    DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG  KGK+Y++N PL DGIDDESY  +FKP++ KVME+F+P AV LQCG+DSLSGDRL  F  +IKGHAK V+F+K F++P
Sbjct:   67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLP 294
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC1_PONAB (Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.625e-99
Identity = 166/228 (72.81%), Postives = 194/228 (85.09%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            +H+DDY+ FLRSI P+   +  +Q++RFNVGEDCPVFDGLF FCQ   GGSV  AVKLN    DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG  KGK+Y++N PL DGIDDESY  +FKP++ KVME+F+P AV LQCG+DSLSGDRL  F  +IKGHAK V+F+K F++P
Sbjct:   67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLP 294
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC1_MOUSE (Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.625e-99
Identity = 166/228 (72.81%), Postives = 194/228 (85.09%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            +H+DDY+ FLRSI P+   +  +Q++RFNVGEDCPVFDGLF FCQ   GGSV  AVKLN    DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG  KGK+Y++N PL DGIDDESY  +FKP++ KVME+F+P AV LQCG+DSLSGDRL  F  +IKGHAK V+F+K F++P
Sbjct:   67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLP 294
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC1_HUMAN (Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.625e-99
Identity = 166/228 (72.81%), Postives = 194/228 (85.09%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            +H+DDY+ FLRSI P+   +  +Q++RFNVGEDCPVFDGLF FCQ   GGSV  AVKLN    DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG  KGK+Y++N PL DGIDDESY  +FKP++ KVME+F+P AV LQCG+DSLSGDRL  F  +IKGHAK V+F+K F++P
Sbjct:   67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLP 294
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC1_BOVIN (Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.625e-99
Identity = 166/228 (72.81%), Postives = 194/228 (85.09%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            +H+DDY+ FLRSI P+   +  +Q++RFNVGEDCPVFDGLF FCQ   GGSV  AVKLN    DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG  KGK+Y++N PL DGIDDESY  +FKP++ KVME+F+P AV LQCG+DSLSGDRL  F  +IKGHAK V+F+K F++P
Sbjct:   67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLP 294
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC2_HUMAN (Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2)

HSP 1 Score: 358.992 bits (920), Expect = 1.799e-98
Identity = 164/228 (71.93%), Postives = 194/228 (85.09%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            +H+D+Y+ FLRSI P+   +  +Q++RFNVGEDCPVFDGLF FCQ   GGSV GAVKLN    D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG  KGK+Y++N P+ DGIDDESY  +FKPII KVME+++P AV LQCGADSLSGDRL  F  ++KGHAK V+ +K F++P
Sbjct:   68 YHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLP 295
[Close]
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC1_STRPU (Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1 PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 3.068e-98
Identity = 165/228 (72.37%), Postives = 196/228 (85.96%), Query Frame = 3 
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            +H+DDYV FLR+I P+   +  +Q++RFNVGEDCPVFDGL+ FCQ  +GGSV GAVKLN    DIAINWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG  KGK+Y++N PL DGIDDESY  +FKPI+ KVME+++P A+ LQCGADSLSGDRL  F  ++KGHAK V+F+K +++P
Sbjct:   66 YHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYNLP 293
The following BLAST results are available for this feature:
BLAST of EY666424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
HDA19_ARATH2.580e-12189.91Histone deacetylase 19 OS=Arabidopsis thaliana GN=... [more]
HDA19_MAIZE1.516e-11385.09Probable histone deacetylase 19 OS=Zea mays PE=2 S... [more]
HDAC1_CHICK7.303e-10073.68Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE... [more]
HDAC1_RAT3.625e-9972.81Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac... [more]
HDAC1_PONAB3.625e-9972.81Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=... [more]
HDAC1_MOUSE3.625e-9972.81Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=... [more]
HDAC1_HUMAN3.625e-9972.81Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=... [more]
HDAC1_BOVIN3.625e-9972.81Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 ... [more]
HDAC2_HUMAN1.799e-9871.93Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=... [more]
HDAC1_STRPU3.068e-9872.37Histone deacetylase 1 OS=Strongylocentrotus purpur... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666424 ID=EY666424; Name=EY666424; organism=Citrus sinensis; type=EST; length=812bp
CCACGCGTCCGTTCCATGCCGATGATTATGTCTCCTTCCTCAGGAGTATC
ACCCCTGAGACTCAGCAGGATCAGCTTAGGCAGCTCAAGCGCTTTAATGT
TGGTGAAGATTGCCCTGTCTTTGACGGTCTTTTCTCCTTCTGTCAAACTT
ATGCTGGGGGCTCTGTTGGTGGTGCTGTCAAGTTGAATCACGGCCTCTGT
GATATTGCTATCAATTGGGCCGGTGGCCTTCATCATGCTAAGAAATGTGA
AGCTTCCGGATTCTGTTATGTCAATGACATTGTCTTGGCCATTTTGGAGC
TACTTAAGCAGCATGAGCGTGTATTATATGTAGATATTGATATCCATCAT
GGAGATGGCGTGGAGGAAGCATTTTATACAACTGATAGGGTAATGACTGT
TTCATTCCATAAGTTCGGAGATTATTTTCCTGGTACAGGGGATATACGTG
ATATTGGTTATTCGAAAGGAAAGTTCTACTCCCTTAATGTTCCTCTTGAT
GATGGTATCGATGATGAGAGCTACCATTACTTGTTCAAACCGATAATCGG
AAAAGTGATGGAAGTTTTTAGACCTGGTGCTGTGGCCCTCCAATGTGGTG
CTGACTCATTGTCTGGGGATAGGTTAGAATCCTTCATCTTTTCAATTAAA
GGGCATGCAAAAGGGGTCAAATTTATTAAAATATTCCATGTGCCTCTGTT
GCTGCTGGGTGGGGGGGGGTAACCCTATTCGAATTGTTGCTCCCTGGTTG
GGGTCACAAAAAGGGAATTTGCCTTTGGAACAAAAAGTTGAAGAACAAAA
TCCCCAAGGATT
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