CN184538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.232e-57 Identity = 90/125 (72.00%), Postives = 95/125 (76.00%), Query Frame = 1 Query: 46 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 MPIRNIA+G P EAT PDAL+AALAEFISTLIFV AG GSGMAFNKLT NGA TPS NISGGHVNPAVTFGAF+GGNI+LLRGILYWIAQLLGS VACL+LKF T Sbjct: 1 MPIRNIAIGRPDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFAT 125 HSP 2 Score: 68.1662 bits (165), Expect = 1.232e-57 Identity = 36/54 (66.67%), Postives = 38/54 (70.37%), Query Frame = 2 Query: 398 ACF-LSSLPNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 AC L G AF LS+GVG NA VFEIVMTFGLVYTVYATA+DPK GS Sbjct: 117 ACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS 170
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.582e-54 Identity = 77/125 (61.60%), Postives = 87/125 (69.60%), Query Frame = 1 Query: 46 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 MP+ IAVG P E +HPD +AA+AEFIS LIFVFAG GSGMAF+KLT G TPS NISGGHVNPAVTFGAFVGGNISL++ ++YW+AQLLGS VACLLLK T Sbjct: 1 MPVSRIAVGAPGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIAT 125 HSP 2 Score: 78.9518 bits (193), Expect = 4.582e-54 Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 2 Query: 398 ACFLSSLPNG-QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKG 553 AC L + G AF+LS+GVGAWNAVVFEIVMTFGLVYTVYATA+DPKKG Sbjct: 117 ACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKG 169
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 2.248e-53 Identity = 82/126 (65.08%), Postives = 89/126 (70.63%), Query Frame = 1 Query: 46 MPIRNIAVGHPREAT-HPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 MP RNIA+G +E HP+ALRAALAEFISTLIFVFAG GSG+AFNK+T NGA TPS NISGGHVNPAVTFG +GGNI+LLRGILYWIAQLLGS AC LL F T Sbjct: 1 MPTRNIAIGGVQEEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFAT 126 HSP 2 Score: 73.9442 bits (180), Expect = 2.248e-53 Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 2 Query: 398 ACFLSSLPNG-QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 ACFL S G + AF LS+GVG+ NA+VFEIVMTFGLVYTVYATA+DPK GS Sbjct: 118 ACFLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS 171
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.249e-53 Identity = 85/125 (68.00%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 46 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 MPIRNIAVG +E HP AL+AALAEFISTLIFVFAG+GSGMAF+KLT GA TP+ NISGGHVNPAVTFGAFVGGNI+L RG+LYWIAQLLGSTVAC LL+F T Sbjct: 1 MPIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFST 125 HSP 2 Score: 65.4698 bits (158), Expect = 2.249e-53 Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 2 Query: 398 ACFLSSLPNGQ-TTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 ACFL G T F L+ GV W A+V EIVMTFGLVYTVYATA+DPKKGS Sbjct: 117 ACFLLRFSTGGLATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS 169
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.444e-52 Identity = 79/125 (63.20%), Postives = 89/125 (71.20%), Query Frame = 1 Query: 46 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 MP+ IAVG P E +HPD +AA+AEFISTLIFVFAG GSGMAF+KLT GA TP+ NISGGHVNPAVTFGAFVGGNISLL+ ++YW+AQLLGS VACLLLK T Sbjct: 1 MPVSRIAVGAPGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIAT 125 HSP 2 Score: 70.4774 bits (171), Expect = 2.444e-52 Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 2 Query: 398 ACFLSSLPNGQTT-SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKG 553 AC L + G AF+LS+GVGA NAVV E+VMTFGLVYTVYATA+DPKKG Sbjct: 117 ACLLLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKG 169
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.058e-52 Identity = 76/125 (60.80%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 46 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 MPI IA+G P EA+ PDA+RAA AEF S +IFVFAG+GSGMA+ KLT +G TP+ N+SGGHVNPAVTFGAF+GGNI+LLR ILYWIAQLLG+ VACLLLK T Sbjct: 1 MPINRIAIGTPGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVST 125 HSP 2 Score: 74.7146 bits (182), Expect = 7.058e-52 Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 2 Query: 398 ACFLSSLPNG-QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKG 553 AC L + G T+AF+LS GV WNAVVFEIVMTFGLVYTVYATA+DPKKG Sbjct: 117 ACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKG 169
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.038e-51 Identity = 79/125 (63.20%), Postives = 89/125 (71.20%), Query Frame = 1 Query: 46 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 MPI IA+G +E HP AL+AA AEFISTLIFVFAG+GSGMAF+KLT G TP+ NISGGHVNPAVTFGAFVGGNI+L RG+LYW+AQLLGSTVAC LL+F T Sbjct: 1 MPINRIALGSHQEVYHPGALKAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFST 125 HSP 2 Score: 68.1662 bits (165), Expect = 2.038e-51 Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 2 Query: 398 ACFLSSLPNG-QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 ACFL G Q T F L+ GV W A+V EIVMTFGLVYTVYATA+DPKKGS Sbjct: 117 ACFLLRFSTGGQATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS 169
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 9.996e-51 Identity = 84/125 (67.20%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 46 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 MPIRNIAVG P+EATHPD L+A LAEFIST IFVFAG GSG+A+NKLT++GA TP+ NISGGHVNPAVTFGAFVGGNI+LLRGI+Y IAQLLGS VA LL FVT Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVT 125 HSP 2 Score: 62.003 bits (149), Expect = 9.996e-51 Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 2 Query: 440 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 AF LS GVG A+V EIVMTFGLVYTVYATA+DPKKG+ Sbjct: 131 AFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGN 169
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.611e-48 Identity = 82/125 (65.60%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 46 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 MPIRNIAVG P+EATHPD L+A LAEFIST IFVFAG GSG+A+NKLT++GA TP+ NISGGHVNPAV FGAFVGGNI+LLRGI+Y IAQLLGS V LL FVT Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVT 124 HSP 2 Score: 62.003 bits (149), Expect = 2.611e-48 Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 2 Query: 440 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 AF LS GVG A+V EIVMTFGLVYTVYATA+DPKKG+ Sbjct: 130 AFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGN 168
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 8.433e-40 Identity = 63/127 (49.61%), Postives = 77/127 (60.63%), Query Frame = 1 Query: 55 RNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKL-----THNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 R G EATHPD++RA LAEF+ST +FVFA EGS ++ +KL H G NTP N+SGGHVNPAVTFGA VGG ++ +R I YWIAQLLG+ +ACLLL+ T Sbjct: 7 RAYGFGRADEATHPDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTT 133 HSP 2 Score: 62.003 bits (149), Expect = 8.433e-40 Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 2 Query: 398 ACFLSSLP-NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 AC L L NG F L+SGVGA N +V EI++TFGLVY VY+T +DPK+GS Sbjct: 125 ACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS 178 The following BLAST results are available for this feature:
BLAST of CN184538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184538 ID=CN184538; Name=CN184538; organism=Citrus sinensis; type=EST; length=558bpback to top |