CN184535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y1926_ARATH (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.021e-61 Identity = 116/154 (75.32%), Postives = 134/154 (87.01%), Query Frame = 2 Query: 11 PVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 472 PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL SG PMHAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+E+SR FELV+G+L YVV+M+T L+PHLKA+L KL Sbjct: 15 PVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKLESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVKEISREFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL 166
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y1995_MYCMM (UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1995 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.085e-26 Identity = 66/157 (42.04%), Postives = 96/157 (61.15%), Query Frame = 2 Query: 14 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 +HP + ++ LLGTW GQGSG YPTI F+Y EE+ F+H G KP + Y QKT + G P+HAE+GY R G +E+V+A +G+ E++ GTY+A VI+++ + A +V +SR F +V EL Y ++M L L+ HL A LR+ Sbjct: 5 LHPDLDALAPLLGTWAGQGSGEYPTIEPFEYLEEVVFSHVG-KPFLVYAQKTRAVADGAPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKEVTALSRSFRMVGDELSYRLRMGAVGL-PLQHHLGARLRR 159
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y3360_MYCUA (UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_3360 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.416e-26 Identity = 65/157 (41.40%), Postives = 96/157 (61.15%), Query Frame = 2 Query: 14 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 +HP + ++ LLGTW GQG+G YPTI F+Y EE+ F+H G KP + Y QKT + G P+HAE+GY R G +E+V+A +G+ E++ GTY+A VI+++ + A +V +SR F +V EL Y ++M L L+ HL A LR+ Sbjct: 5 LHPDLDALAPLLGTWAGQGAGEYPTIEPFEYLEEVVFSHVG-KPFLVYAQKTRAVADGTPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKEVTALSRSFRMVGDELSYRLRMGAVGL-PLQHHLGARLRR 159
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y2833_MYCPA (UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium paratuberculosis GN=MAP_2833c PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.156e-26 Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 2 Query: 14 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 +HP +A ++ LLGTW G+GSG YPTI FDY EE+ F+H G KP +AY QKT G+P+HAE+GY R G +E+V+A +G+ E++ G+Y +I+++ L +A +V ++R F + EL Y VQM L+ HL AVL + Sbjct: 5 LHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAADGKPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPSAKEVTALARWFRIDGDELSYSVQMGAVG-QPLQDHLAAVLHR 159
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y3611_MYCA1 (UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium (strain 104) GN=MAV_3611 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.566e-25 Identity = 64/157 (40.76%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 14 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 +HP +A ++ LLGTW G+GSG YPTI FDY EE+ F+H G KP +AY QKT G+P+HAE+GY R G +E+V+A +G+ E++ G+Y +I+++ L A +V + R F + +L Y VQM L+ HL AVL + Sbjct: 5 LHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAADGKPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPTAKEVTALGRWFRIDGDKLSYSVQMGAVG-QPLQDHLAAVLHR 159
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y449_MYCVP (UPF0678 fatty acid-binding protein-like protein Mvan_0449 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_0449 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.489e-25 Identity = 66/160 (41.25%), Postives = 94/160 (58.75%), Query Frame = 2 Query: 14 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELV-------GNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 472 +HP +A ++ LLGTW G+GSG YPTI F Y EE+ F H G KP + Y Q+T G P+HAE+GY R + IE ++A TG+ E+Q+G A+ +++ ELV G+A +V +V R EL L Y ++MA L+ HL AVLR++ Sbjct: 8 LHPDVAALAPLLGTWVGEGSGEYPTIEPFGYTEEITFGHVG-KPFLTYAQRTRAADDGRPLHAETGYLRASAPDRIEWILAHPTGITEIQEGQLTADGDGLRM--ELVSSSIGRSGSAKEVTDVGRSIELRGDTLTYTLRMAAVG-QPLQHHLSAVLRRV 163
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y6574_MYCS2 (UPF0678 fatty acid-binding protein-like protein MSMEG_6574 OS=Mycobacterium smegmatis GN=MSMEG_6574 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.261e-24 Identity = 66/160 (41.25%), Postives = 91/160 (56.88%), Query Frame = 2 Query: 8 VPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWR-PNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 + +HP IAP++ LLGTW G G+G YPTI +F+Y EE+ F H GKP + Y Q+T G P+HAE GY R P PD +E V+A TG+ E+Q+GT I + + L +A V ++R F + EL Y +QM L+ HL A LR+ Sbjct: 2 IDLHPNIAPLAPLLGTWAGPGAGEYPTIQSFEYLEEITFGHV-GKPFLTYQQRTKARDDGRPLHAEVGYIRVPAPD-RVEWVLAHPTGITEIQEGTLTVGGDRITMDVKATTIGLTASAKNVTALARSFRITGDELTYTLQMGAVG-QPLQHHLAATLRR 158
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y421_MYCSS (UPF0678 fatty acid-binding protein-like protein Mmcs_0421 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_0421 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.954e-24 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 14 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQ--SELVG---NASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 472 VHP + ++ LLGTW G+GSG YPTI FDY EE+ F H+ GKP + Y Q+T G P+HAE+GY R ++E ++A TG+ E+Q+G A+ +++ S +G +A +V V R ++ L Y ++MA L+ HL AVL ++ Sbjct: 18 VHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHT-GKPFLTYVQRTRAADDGRPLHAETGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMDLISTDIGRSESAKEVMAVGRSMQISGDTLTYTLRMAAVG-RPLQHHLSAVLHRV 173
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y408_MYCSJ (UPF0678 fatty acid-binding protein-like protein Mjls_0408 OS=Mycobacterium sp. (strain JLS) GN=Mjls_0408 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.954e-24 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 14 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQ--SELVG---NASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 472 VHP + ++ LLGTW G+GSG YPTI FDY EE+ F H+ GKP + Y Q+T G P+HAE+GY R ++E ++A TG+ E+Q+G A+ +++ S +G +A +V V R ++ L Y ++MA L+ HL AVL ++ Sbjct: 18 VHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHT-GKPFLTYVQRTRAADDGRPLHAETGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMDLISTDIGRSESAKEVMAVGRSMQISGDTLTYTLRMAAVG-RPLQHHLSAVLHRV 173
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y2745_MYCTA (UPF0678 fatty acid-binding protein-like protein MRA_2745 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2745 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.466e-23 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 20 PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 PA+ +S LLG+W G+G+G YPTI F+Y EE+ F H G KP + YTQ+T + G+P+H+E+GY R G +E+V+A +G+ E++ GTY+ VI+L+ L A +V + R + + EL Y +QM L+ HL AVL + Sbjct: 7 PALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162 The following BLAST results are available for this feature:
BLAST of CN184535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184535 ID=CN184535; Name=CN184535; organism=Citrus sinensis; type=EST; length=606bpback to top |