EY666421

Overview
NameEY666421
Unique NameEY666421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY666421 vs. ExPASy Swiss-Prot
Match: Y4919_ARATH (Uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Arabidopsis thaliana GN=At4g19190 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.211e-69
Identity = 123/145 (84.83%), Postives = 133/145 (91.72%), Query Frame = 1 
Query:   37 EEKKKSRPKDVFGRPLPTEEEFEILKNAPRLETGAPARVKPFGVEVRNVKCLRCGNFGHQSGDRECPLKDAIMPNEESRLKRDDPLTAIMAHVDPSEPLKWELKRQPGNFSPPRGGFKPDDPNQQIVAEDIFDEYGGFLAGDSVP 471
            +E+KK RPKDVFGR LPTEEEFE+LKNAPR+ETG P RVKPF VEVRNVKCLRCGNFGHQSGDR+CPLKDA+MPNEE RLKRDDPLTAI+AH DPSEPLKWELK++PG  SPPRGGF PDDPNQQIVAEDIFDEYGGFL G S+P
Sbjct:  163 QERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPG-LSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEG-SIP 305
The following BLAST results are available for this feature:
BLAST of EY666421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4919_ARATH3.211e-6984.83Uncharacterized zinc finger CCHC domain-containing... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666421 ID=EY666421; Name=EY666421; organism=Citrus sinensis; type=EST; length=851bp
ATTTATTGTAGGCAACCAGAGTCGAAGCCTGTGGCTGAAGAAAAGAAGAA
ATCAAGGCCAAAAGATGTGTTTGGGCGACCTTTACCTACTGAAGAAGAGT
TTGAAATCCTTAAAAATGCTCCACGGCTGGAGACAGGTGCTCCTGCAAGG
GTAAAACCATTTGGTGTTGAAGTAAGAAATGTGAAATGTTTAAGATGTGG
AAATTTTGGGCATCAAAGTGGTGATCGTGAGTGTCCATTGAAGGATGCAA
TAATGCCTAATGAAGAAAGTCGATTGAAAAGAGATGACCCCTTGACTGCT
ATCATGGCTCACGTAGATCCTAGTGAGCCTCTCAAGTGGGAGCTGAAGCG
ACAACCAGGAAATTTTAGTCCTCCTCGTGGAGGTTTTAAACCTGATGATC
CCAATCAGCAGATAGTTGCTGAGGACATTTTTGATGAATATGGGGGGTTT
CTGGCTGGGGATAGTGTACCCGACTTGTTGAGCAGCTTGTCGGGCAAACG
TAGAAAGAAGTCCAAAAAGAAAAGTAAACACAAGAGGCAGGCATCATCTG
ATAGTGAAGAATTAAGAGTTTCTGATGACGATGGGGTGACTTCCCCTTCT
GATGATGAAGGCAGGAGGTCAAAGAAGGAGAAGAACCATAAGAAAAAAAC
GAAGCGAAACTATCCAAATCCTATTCGTCTGATGTTTTAGAATGGAATAC
CCATCGTAAAAAATCCCGACACAACCCCATTATTCCTTCCCAGAATTCTA
ATTCTGACAAGAATCTTAAAAATAAAAGGGACAGGGCAATGGCTTTCTTT
TTTCTTCCTGAAAATAGCCTCTTGATTTTTCCTCTTTTGAAAAAAAAGAA
A
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