CN184499

Overview
NameCN184499
Unique NameCN184499
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length362
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9805 contig Csv1_Contig9805:266..627. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.685e-42
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 3
Query:    6 AILASMTSILLGYDIGVMSGAALYIKDDFKVSDTQIEILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSPAS 362
            AILASMTSI+LGYDIGVMSGAA++IKDD K+SD Q+EIL+GILNIYSLIGS AAGRTSDWIGRRYTIV                TNY F+M GRFVAG+GVGYA+MIAPVYT E++PAS
Sbjct:   30 AILASMTSIILGYDIGVMSGAAIFIKDDLKLSDVQLEILMGILNIYSLIGSGAAGRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTTEVAPAS 148          
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.285e-42
Identity = 84/119 (70.59%), Postives = 98/119 (82.35%), Query Frame = 3
Query:    6 AILASMTSILLGYDIGVMSGAALYIKDDFKVSDTQIEILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSPAS 362
            AILASMTSI+LGYDIGVMSGA+++IKDD K+SD Q+EIL+GILNIYSL+GS AAGRTSDW+GRRYTIV                TNY F+M GRFVAG+GVGYA+MIAPVYTAE++PAS
Sbjct:   30 AILASMTSIILGYDIGVMSGASIFIKDDLKLSDVQLEILMGILNIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPAS 148          
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 5.321e-41
Identity = 87/119 (73.11%), Postives = 93/119 (78.15%), Query Frame = 3
Query:    6 AILASMTSILLGYDIGVMSGAALYIKDDFKVSDTQIEILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSPAS 362
            AILASMTSILLGYDIGVMSGA +YIK D K++D QI IL G LNIYSLIGS AAGRTSDWIGRRYTIV                 NYAFLM GRF+AG+GVGYALMIAPVYTAE+SPAS
Sbjct:   40 AILASMTSILLGYDIGVMSGAMIYIKRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSPNYAFLMFGRFIAGIGVGYALMIAPVYTAEVSPAS 158          
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.027e-32
Identity = 70/119 (58.82%), Postives = 87/119 (73.11%), Query Frame = 3
Query:    6 AILASMTSILLGYDIGVMSGAALYIKDDFKVSDTQIEILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSPAS 362
            AI+AS+ SI+ GYD GVMSGA ++I+DD K++DTQIE+L GILN+ +L+GSL AG+TSD IGRRYTI                  NY  LM GR +AGVGVG+ALMIAPVY+AE+S AS
Sbjct:   26 AIVASIISIIFGYDTGVMSGAQIFIRDDLKINDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAPVYSAEISSAS 144          
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.897e-30
Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 3
Query:    6 AILASMTSILLGYDIGVMSGAALYIKDDFKVSDTQIEILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSPAS 362
            AI+AS+ SI+ GYD GVMSGA ++I++D K +D QIE+L GILN+ +L+GSL AGRTSD IGRRYTIV                 NY  L+ GR  AG+GVG+ALM+APVY+AE++ AS
Sbjct:   21 AIVASIVSIIFGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRTSDIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATAS 139          
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.834e-26
Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 3
Query:    6 AILASMTSILLGYDIGVMSGAALYIKDDFKVSDTQIEILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSP 356
            A  AS+ ++LLGYD+GVMSGA L+I+ D K+++ Q E+LIG L+I SL GSLA GRTSD IGR++T+                  ++  LM GR +AG+G+G  +MIAPVY AE+SP
Sbjct:   59 AFFASLNNVLLGYDVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLFGSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISP 175          
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.545e-14
Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 3
Query:    6 AILASMTSILLGYDIGVMSGAALYIKDDFKVSDTQI---EILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSPA 359
            A  A +  +L GYD GV+SGA LYI+DDFK  D      E+++ +    +++G+   G  +D +GRR  I+                 N + L+ GR   G+GVG A M AP+Y +E SPA
Sbjct:   32 AFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRNTWLQEMIVSMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPA 152          
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.235e-13
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 3
Query:    9 ILASMTSILLGYDIGVMSGAALYIKDDFKV---SDTQIEILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSPA 359
            + A +  +L GYD GV+SGA LYIKDDF+V   S    E ++ +  + ++IG+ A G  +D+ GR+   +                 +   L+ GR + G+GVG A + APVY AE SP+
Sbjct:   36 VTAGIGGLLFGYDTGVISGALLYIKDDFEVVKQSSFLQETIVSMALVGAMIGAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAPVYIAEASPS 155          
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe GN=itr2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.973e-12
Identity = 36/118 (30.51%), Postives = 61/118 (51.69%), Query Frame = 3
Query:   12 LASMTSILLGYDIGVMSGAALYIKDDFK--VSDTQIEILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSPA 359
            +A ++ +L GYD GV+SGA   +  D    +S  Q E++    +  +LI +  +G  +DW+GR+  ++                 N A ++ GRF+ G G+G   +I P+Y  EL+PA
Sbjct:   87 VAGISGLLFGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITELAPA 204          
BLAST of CN184499 vs. ExPASy Swiss-Prot
Match: GTR12_XENLA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Xenopus laevis GN=slc2a12 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.190e-12
Identity = 37/117 (31.62%), Postives = 64/117 (54.70%), Query Frame = 3
Query:    6 AILASMTSILLGYDIGVMSGAALYIKDDFKVSDTQIEILIGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYALMIAPVYTAELSP 356
            +++A+++ +L+GY++G++SGA L ++   +++  Q EI++  L I +L+ SL  G   D  GRR TI+                 +Y  L+ GR   GV +  + +   VY AELSP
Sbjct:   38 SVIAAISGLLVGYELGIISGALLQLQSLLELTCQQQEIVVSALLIGALVASLVGGCLIDLYGRRTTIIFTSILLVFANLLPVVVVSYGSLIAGRIFIGVSISLSAIATCVYIAELSP 154          
The following BLAST results are available for this feature:
BLAST of CN184499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PLT2_ARATH3.685e-4272.27Putative polyol transporter 2 OS=Arabidopsis thali... [more]
PLT1_ARATH6.285e-4270.59Putative polyol transporter 1 OS=Arabidopsis thali... [more]
PLT5_ARATH5.321e-4173.11Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
PLT3_ARATH2.027e-3258.82Probable polyol transporter 3 OS=Arabidopsis thali... [more]
PLT6_ARATH1.897e-3055.46Probable polyol transporter 6 OS=Arabidopsis thali... [more]
PLT4_ARATH2.834e-2649.57Probable polyol transporter 4 OS=Arabidopsis thali... [more]
INT2_ARATH5.545e-1436.36Probable inositol transporter 2 OS=Arabidopsis tha... [more]
INT1_ARATH1.235e-1335.83Probable inositol transporter 1 OS=Arabidopsis tha... [more]
ITR2_SCHPO3.973e-1230.51Myo-inositol transporter 2 OS=Schizosaccharomyces ... [more]
GTR12_XENLA5.190e-1231.62Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005J22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005J22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184499 ID=CN184499; Name=CN184499; organism=Citrus sinensis; type=EST; length=362bp
GCGGTGCCATTTTGGCTTCCATGACTTCAATCTTACTAGGTTATGACATT
GGAGTAATGAGTGGAGCTGCACTCTACATCAAAGACGACTTTAAAGTCAG
TGACACACAAATCGAGATCTTAATTGGAATCTTGAATATTTACTCACTCA
TCGGCTCACTGGCCGCCGGCAGAACCTCCGACTGGATTGGCCGCCGGTAC
ACTATCGTGTTAGCCGGGGCCATCTTCTTCGCCGGAGCGCTGCTCATGGG
GTTCGCCACAAACTATGCTTTCCTCATGGGGGGTCGCTTCGTCGCCGGTG
TCGGCGTCGGATACGCTCTCATGATCGCTCCCGTTTACACAGCTGAACTC
TCTCCGGCTTCC
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