EY666413

Overview
NameEY666413
Unique NameEY666413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666413 vs. ExPASy Swiss-Prot
Match: Y4523_ARATH (Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.776e-33
Identity = 87/164 (53.05%), Postives = 103/164 (62.80%), Query Frame = 2
Query:  227 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLAKFDWLLL*W**KNCWRL---NTCPMILLVNILFHWEKQTY*VCYASK-KLLVKLTETFQKWRNEGTPLIPRTPCFSGLYSQKID 706
            F+EFS ADL+AATNNFSSD IVSESGEKAPN+VYKGRLQ    NRRWIAVKKFTK AWP+PKQFA+EAWGVGKLRH RLA     L+ +      RL      P   L   LFHWE QT  + +A + ++   + E       EG PL      +  L+ +  D
Sbjct:   58 FSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQ----NRRWIAVKKFTKMAWPEPKQFAEEAWGVGKLRHNRLAN----LIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQT--IEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGD 211          
BLAST of EY666413 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 2
Query:  227 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLAKF--------DWLLL*W**KNCWRLNTCPMILLVNILFHWEKQ 571
            F EFS+  +R AT+ F+++ IVSE GE+APNVVYKG+L    +N+R IAVK+F + +WPD +QF +EA  VG+LR+ R+A          + LL+             P   L   LFHWE Q
Sbjct:   41 FREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKL----ENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLI---------AEFMPNETLAKHLFHWESQ 150          
BLAST of EY666413 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.597e-12
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  233 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL 463
            +FS + L+ ATN+FS + IVS+   +  +VV+KGRLQ+G     ++A+K+F   AW DPK F +EA  VGKLRHKRL
Sbjct:   37 KFSFSALKTATNHFSPENIVSD---QTSDVVFKGRLQNGG----FVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRL 106          
The following BLAST results are available for this feature:
BLAST of EY666413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y4523_ARATH4.776e-3353.05Probable serine/threonine-protein kinase At4g35230... [more]
Y5126_ARATH9.668e-1843.09Probable serine/threonine-protein kinase At5g41260... [more]
SSP_ARATH1.597e-1250.65Probable inactive receptor-like kinase SSP OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666413 ID=EY666413; Name=EY666413; organism=Citrus sinensis; type=EST; length=838bp
ATTAGCTTCAGCTGCTGACCTGGGGGGTTTGGTTGGTTCATTTCTTCTGA
GTCAACTCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGA
CACCTCTCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCG
CAATCATCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCG
CTGCCGGCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGAC
CTCAGAGCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAG
CGGCGAAAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAA
ATGATAACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGG
CCCGATCCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAG
GCATAAGAGGCTGGCGAAATTTGATTGGCTATTGTTGTGATGGTGATGAA
AGAATTGCTGGCGGCTGAATACATGCCCAATGATACTCTTGGTAAACATT
TTATTTCACTGGGAGAAACAAACCTATTGAGTGTGCTATGCGTCCAAAAA
GTTGCTCGTGAAACTCACTGAAACATTTCAAAAATGGAGGAATGAGGGGA
CGCCCCTTATCCCGCGAACTCCATGTTTCTCGGGGCTCTATTCGCAGAAA
ATTGATTGACCCCGGACTACACAGGCCTAGGCGTCGCTAAAAGAAAGCAC
GGCAGCATCTCTGCTTAGGGTAACCACTTGCGCCTCAGTTTTCCGAAGAT
TCCTCACAACAGGAGGGTTTACTGTCACTAATGTCGAG
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