EY666410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.136e-54 Identity = 103/148 (69.59%), Postives = 121/148 (81.76%), Query Frame = 3 Query: 111 PLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLG 554 P + NGS ++ SVPSS+F G+SLKKV+SR SKV S S +I A VDE+KQT +DRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YI+ GLR YN DN +D YIAPAFMDKLVVHITKNFM+L N+ VP LG Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILG 162
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.261e-53 Identity = 106/150 (70.67%), Postives = 124/150 (82.67%), Query Frame = 3 Query: 111 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLG 554 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYI+QGLR YNLDN +D YIAPAFMDKLVVHITKNF+SL NI +P LG Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILG 162
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.261e-53 Identity = 106/150 (70.67%), Postives = 124/150 (82.67%), Query Frame = 3 Query: 111 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLG 554 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYI+QGLR YNLDN +D YIAPAFMDKLVVHITKNF+SL NI +P LG Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILG 162
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.210e-51 Identity = 104/151 (68.87%), Postives = 119/151 (78.81%), Query Frame = 3 Query: 114 LSFNGSGAATSVPSSSFFGTSLKKV-SSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLG 554 L+ NGSG S PSS+FFGTSLKKV SSR+P SK+ S SFKI A E++E +QT+ DRW+GLAYD SDDQQDITRGKG VDSLFQAPM GTHYAV+SS+ Y++ GLR YN DN D YIAPAF+DKLVVHI KNFM+L NI VP LG Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILG 166
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 4.924e-51 Identity = 105/151 (69.54%), Postives = 121/151 (80.13%), Query Frame = 3 Query: 114 LSFNGSGAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLG 554 L+ NGSGA S P+S+FFGTSLKK V+SR+P SKV + SFKI A E++E++QT +DRWKGLAYD SDDQQDITRGKG VD LFQAPM GTHYAVMSSY+Y++ GLR LDN D YIAPAF+DKLVVHITKNFM+L NI VP LG Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILG 164
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 8.399e-51 Identity = 118/215 (54.88%), Postives = 141/215 (65.58%), Query Frame = 3 Query: 111 PLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLGYMLEVKE*EQTFHCQVNIRQEGASTHL*RMPEYFESGFAL*NTPTFYTRQLPSTHSHINRKSN 743 PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE VD KQT DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y++QGLR YNLDN +D YIAPAFMDKLVVHITKNF+ L NI VP LG + K ++F C++ R+ G + + E ESG A P RQ + I RK N Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILG-IWGGKGQGKSFQCELVFRKMGINPIMMSAGE-LESGNA--GEPAKLIRQRYREAAEIIRKGN 225
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.110e-50 Identity = 116/219 (52.97%), Postives = 141/219 (64.38%), Query Frame = 3 Query: 99 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLGYMLEVKE*EQTFHCQVNIRQEGASTHL*RMPEYFESGFAL*NTPTFYTRQLPSTHSHINRKSN 743 A PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE D KQT DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y++QGLR YN+DNT+D YIAP+FMDKLVVHITKNF+ L NI VP LG + K ++F C++ R+ G + + E ESG A P RQ + I RK N Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILG-VWGGKGQGKSFQCELVFRKMGINPIMMSAGE-LESGNA--GEPAKLIRQRYREAAEIIRKGN 225
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 2.702e-49 Identity = 108/185 (58.38%), Postives = 133/185 (71.89%), Query Frame = 3 Query: 96 MAAAV---------PLSFNGSGA-ATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLGYMLEVKE*EQTFHCQVNIRQEG 620 MAAAV PLS NGSG+ A S P+S+F G + VS +K + SFK+ A V E+KQT DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y++QGLR YNLDN +D YIAPAFMDKLVVHITKNF++L NI VP LG + K ++F C++ + + G Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILG-IWGGKGQGKSFQCELVMAKMG 183
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.287e-48 Identity = 114/217 (52.53%), Postives = 145/217 (66.82%), Query Frame = 3 Query: 99 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLGYMLEVKE*EQTFHCQVNIRQEGASTHL*RMPEYFESGFAL*NTPTFYTRQLPSTHSHINRKSN 743 A+ PLS N S A TSVPS++FFG SLKKV ++ + KV + + ++ A EVDE TK+DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y++Q L+TY LDN +D YIAPAFMDKLVVHITKNF++L NI VP LG + K ++F C++ R+ G + + E ESG A P RQ + I RK N Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILG-VWGGKGQGKSFQCELVFRKMGINPIMMSAGE-LESGNA--GEPAKLIRQRYREAAEIIRKGN 220
BLAST of EY666410 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.255e-46 Identity = 94/155 (60.65%), Postives = 114/155 (73.55%), Query Frame = 3 Query: 90 SLMAAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYITQGLRTYNLDNTIDSLYIAPAFMDKLVVHITKNFMSLTNISVPPHLG 554 S + A + N S VP+S+F G+ LK VSSR SK+ + +FKI AE DE KQT++D+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+YI+ GLR Y+ DN +D YIAPAFMDKL VHI KNF++L NI VP LG Sbjct: 6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILG 159 The following BLAST results are available for this feature:
BLAST of EY666410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666410 ID=EY666410; Name=EY666410; organism=Citrus sinensis; type=EST; length=825bpback to top |