EY666409

Overview
NameEY666409
Unique NameEY666409
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY666409 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.263e-40
Identity = 95/169 (56.21%), Postives = 117/169 (69.23%), Query Frame = 2 
Query:   47 VSMAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLXXXXXXXXXXXX-IKQVSES--RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 544
            +S+AA++  AV+ PRVP+ +T       C A+P L             +K VS +  ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:    3 ISVAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY666409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH3.263e-4056.21Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666409 ID=EY666409; Name=EY666409; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGATCGAAAAGAAACGAAAGAACACCACAAATCAAAAGTAT
CAATGGCAGCGACGGCGTACGCGGCGGTGTTAACTCCACGTGTCCCCTCA
ACCACCACCGTCAAAGTCAAATCTTCTCACTGCTTTGCTCTTCCCTGCCT
CCCTCCTCGTTCGTCAACGTCACCATTCTCTTCTTCCATTAAACAAGTTT
CAGAGTCGAGAAGGTTTCCTTTGCTTCAGGTTAGAGCCTCTTCCTCAGAA
GAGACATCCACAGTTGATGCAGATGAACTTTTTTCAGACTTGAAGGAAAA
GTGGGATGCCGTTGAAAACAAGTCCACGGTACTTCTCTATGGAGGTGGGG
CAATAGTGGCTGTTTGGTTATCCTCAACTATTGTTGGTGCCATCAATTCA
GTGCCTTTGCTTCCCAAACTCTTGGAGTTGATTGGACTTGGTTATACTGG
ATGGTTTGTCTACAGATACCTTCTCTTCAAGTCAAGCAGAAAAGAACTAG
CCACGGATATTGAAGCACTGAAGAAGAAGATTGCTGGAACTGAATAGATT
GTACATTCTGGAGGCAATTCATGTTTGTCCCCTGATAGTCATTTATTTTG
GTCCTCTAATATTGGCTTATAAGCAACTTGTATCCTGGAAAGTAGGCTGC
GAACAGAATCCTTTTATACCTGGAATTTTCCAAAAAATCCCCTGGAAAAA
AAAAAATTTGAAAAAATTATGGGGAATAGCCAGCAATCATTTGGCTTCTG
TGTTATAAAACCCTAAGTACAACATATTTTTTCCCAGACGGAACACTTAG
TCTAGAAACACATTGAACTCTACTTCTTTAANAACAACCCGCCCACACGA
ATCATGAAAGCGACAACAAAGA
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