CN184423

Overview
NameCN184423
Unique NameCN184423
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length425
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN184423 vs. ExPASy Swiss-Prot
Match: LINS_ARATH (Linalool synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS14 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.550e-38
Identity = 75/111 (67.57%), Postives = 90/111 (81.08%), Query Frame = -2 
Query:   92 PPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQECLSPNPFSASFTRASFNIARMVPLMYSYDDNQRLPRLEEYIKSLL 424
            P IVSS ATILRLWDDLGSAKDENQDG DGSY+  Y+ E++  T ++A+ H   KIS AWKRLN+ECL+P PFS SF++A  NIAR VPLMYSYDD+QRLP  +EY+KSL+
Sbjct:  461 PGIVSSAATILRLWDDLGSAKDENQDGTDGSYVECYLNEYKGSTVDEARTHVAQKISRAWKRLNRECLNPCPFSRSFSKACLNIARTVPLMYSYDDDQRLP--DEYLKSLM 569
The following BLAST results are available for this feature:
BLAST of CN184423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LINS_ARATH9.550e-3867.57Linalool synthase, chloroplastic OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005H19_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184423 ID=CN184423; Name=CN184423; organism=Citrus sinensis; type=EST; length=425bp
TTTTTTTTAAAAGAAACTTCCATAGTATACGTACGTAGGTAAGGAGCTTT
ATCACTAACTAGTACACTCCTTGAGTAGGCAAATTATCGAAGAGGAGGGA
CTTAATATACTCCTCGAGTCTCGGAAGCCTTTGATTGTCATCATAGCTAT
ACATCAAAGGAACCATTCTGGCAATGTTAAAAGAAGCCCTTGTGAAAGAT
GCTGAAAATGGATTTGGGGAGAGGCATTCCTGGTTTAGGCGCTTCCATGC
ATCTGAAATCTTATCCATAGCATGCTTTTGTGCATCTTCAGCTGTTACGT
CTTGGTGCTCCATCATGTAGTAATATATGTAAGATCCATCGTTGCCATCT
TGATTTTCATCCTTAGCACTTCCTAAGTCGTCCCAAAGTCGAAGAATTGT
TGCGACGGACGATACTATGGGCGGG
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