CN184422

Overview
NameCN184422
Unique NameCN184422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184422 vs. ExPASy Swiss-Prot
Match: ML423_ARATH (MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.244e-34
Identity = 63/105 (60.00%), Postives = 86/105 (81.90%), Query Frame = -3
Query:  262 GDGKAPGSVRLITYADGSPIVKVSTEKIENVDEANKVVTYKVIDGDLLKYYKAFKGIVSVNPKGEGSLVKWACEFEKASDDVPDPSVIKDFALKNFQEVDDYILK 576
            GDG APGS+RLITY +GSP+VK+S E+IE VD  NK ++Y +I G++L+YYK FKG ++V PK  GSL+KW+ EFEK + ++ DP VIKDFA+KNF+E+D+Y+LK
Sbjct:   47 GDGNAPGSIRLITYGEGSPLVKISAERIEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVIPKDGGSLLKWSGEFEKTAHEIDDPHVIKDFAVKNFKEIDEYLLK 151          
BLAST of CN184422 vs. ExPASy Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.119e-14
Identity = 43/107 (40.19%), Postives = 65/107 (60.75%), Query Frame = -3
Query:  265 GDGKAPGSVRLITYA-DGSPIVKVSTEKIENVDEANKVVTYKVIDGDLLKYYKAFKGIVSVNPK--GEGSLVKWACEFEKASDDVPDPSVIKDFALKNFQEVDDYIL 576
            GD    GS+    Y  DG    KV+ E+IE V+    ++T++VI+GDL+K YK+F   + V PK  G GS+V W  E+EK SD+V  P  +  F ++  QE+D+++L
Sbjct:   53 GDWGTVGSIVFWNYVHDGE--AKVAKERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQVTPKHGGPGSIVHWHLEYEKISDEVAHPETLLQFCVEVSQEIDEHLL 157          

HSP 2 Score: 78.1814 bits (191), Expect = 3.257e-14
Identity = 42/107 (39.25%), Postives = 66/107 (61.68%), Query Frame = -3
Query:  265 GDGKAPGSVRLITYA-DGSPIVKVSTEKIENVDEANKVVTYKVIDGDLLKYYKAFKGIVSVNPK--GEGSLVKWACEFEKASDDVPDPSVIKDFALKNFQEVDDYIL 576
            GD    GS+    Y  DG    KV+ E+IE VD    ++T++VI+GDL+K YK+F   + V PK  G GS+V W  E+EK +++V  P  +  FA++  +E+D+++L
Sbjct:  209 GDWGTVGSIVFWNYVHDGE--AKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYEKINEEVAHPETLLQFAVEVSKEIDEHLL 313          
BLAST of CN184422 vs. ExPASy Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 7.256e-14
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = -3
Query:  265 GDGKAPGSVRLITYA-DGSPIVKVSTEKIENVDEANKVVTYKVIDGDLLKYYKAFKGIVSVNPK--GEGSLVKWACEFEKASDDVPDPSVIKDFALKNFQEVDDYIL 576
            GD    GS+    Y  DG    KV+ E+IE V+    ++T++VI+GDLLK YK+F   + V PK  G GS+V W  E+EK  D V  P    DF ++  +E+D+++L
Sbjct:   64 GDWGKVGSIVFWNYVHDGE--AKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEKIDDKVAHPETFLDFCVEVSKEIDEHLL 168          
BLAST of CN184422 vs. ExPASy Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.238e-13
Identity = 41/107 (38.32%), Postives = 65/107 (60.75%), Query Frame = -3
Query:  265 GDGKAPGSVRLITYA-DGSPIVKVSTEKIENVDEANKVVTYKVIDGDLLKYYKAFKGIVSVNPK--GEGSLVKWACEFEKASDDVPDPSVIKDFALKNFQEVDDYIL 576
            GD    GS+    Y  DG    KV+ E+IE V+    ++T++VI+GDL+K YK+F   + V PK  G GS+V W  E+EK S++V  P  +  F ++  +E+D+++L
Sbjct:   66 GDWGTVGSIVFWNYVHDGE--AKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEVSKEIDEHLL 170          

HSP 2 Score: 76.2554 bits (186), Expect = 1.238e-13
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = -3
Query:  265 GDGKAPGSVRLITYADGSPIVKVSTEKIENVDEANKVVTYKVIDGDLLKYYKAFKGIVSVNPK--GEGSLVKWACEFEKASDDVPDPSVIKDFALKNFQEVDDYIL 576
            GD    GS+    Y       KV+ E+IE V+    ++T++VIDGDL+K YK+F   + V PK  G GS+V W  E+EK S++V  P  +  F ++  +E+D+++L
Sbjct:  228 GDWGQVGSIVFWNYVHDRE-AKVAKERIEAVEPNKNLITFRVIDGDLMKEYKSFLLTIQVTPKLGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEVSKEIDEHLL 332          
BLAST of CN184422 vs. ExPASy Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.869e-12
Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = -3
Query:  265 GDGKAPGSVRLITYADGSPIVKVSTEKIENVDEANKVVTYKVIDGDLLKYYKAFKGIVSVNPK-GE-GSLVKWACEFEKASDDVPDPSVIKDFALKNFQEVDDYIL 576
            GD    GS+ +  Y     +  V   KIE VD    ++T+KV++GDL+  YK+F   + V PK GE GS+  W  E+EK S++V  P  +  F ++  +E+D+++L
Sbjct:   51 GDWGKVGSIVIWKYVHDGKLT-VGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAHWHLEYEKISEEVAHPETLLQFCVEISKEIDEHLL 155          
The following BLAST results are available for this feature:
BLAST of CN184422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ML423_ARATH8.244e-3460.00MLP-like protein 423 OS=Arabidopsis thaliana GN=ML... [more]
MLP34_ARATH1.119e-1440.19MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP... [more]
MLP31_ARATH7.256e-1440.19MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP... [more]
MLP28_ARATH1.238e-1338.32MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP... [more]
MLP43_ARATH8.869e-1235.85MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005H18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184422 ID=CN184422; Name=CN184422; organism=Citrus sinensis; type=EST; length=578bp
TATTTAATGAAGCAATATATAAATAGTAATGGAGGTAATTAAATATGTAG
CTGGCGGAAAAGCTCTTACTCCTTACCAACTCACAATACAGATACATAAC
AAAATAAACAATGTATAGAATACATAGACGGAAGGTAATGACTCCACATT
ATTAATAATATTGTTATTTTAAAAGTCCAACAACACAAGCACAAGATTAA
TACATGATATATATGCAACGTAAGTGGGTGCTTACACAGCTTTTGCTCCT
AATTAATTGGCCTTGAGAATATAGTCATCCACTTCCTGAAAGTTCTTGAG
TGCAAAGTCCTTGATGACGCTTGGATCGGGAACATCATCGCTTGCCTTTT
CAAACTCACAAGCCCACTTCACCAAGCTCCCTTCCCCCTTCGGATTAACA
CTCACGATGCCTTTGAAAGCCTTGTAGTACTTCAACAGGTCCCCATCAAT
TACCTTGTAAGTAACCACCTTGTTTGCTTCATCTACATTCTCGATCTTCT
CTGTCGATACCTTCACAATTGGAGAACCATCAGCATAAGTGATGAGACGC
ACAGAGCCAGGGGCCTTGCCGTCGCCCT
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