CN184402

Overview
NameCN184402
Unique NameCN184402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length441
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184402 vs. ExPASy Swiss-Prot
Match: DHBK_SOLLC (Putative 3,4-dihydroxy-2-butanone kinase OS=Solanum lycopersicum GN=DHBK PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.348e-16
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = -1 
Query:  211 RRRLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGXXXXXXXXXXXXXAVKDMYQAS 435
            + RL+AG DP+ AFI+S+EAA AGAESTKHMQAQAGRSTY+  +ILASVPDPG             AVK+ Y  +
Sbjct:  520 KERLNAGDDPADAFIISAEAASAGAESTKHMQAQAGRSTYVPGDILASVPDPGAMAAAAWYRAAALAVKEKYNTA 594
The following BLAST results are available for this feature:
BLAST of CN184402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHBK_SOLLC2.348e-1658.67Putative 3,4-dihydroxy-2-butanone kinase OS=Solanu... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005H02_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184402 ID=CN184402; Name=CN184402; organism=Citrus sinensis; type=EST; length=441bp
TTTTTTTTTGACTTTCAACGTTCATTTCTCTTACAATTTTGGGGAGCATG
TGTGCAGAAAACTCACTATCTCAGCATTATGCACAAAAATGCATAAGCGG
ATAGCCTAATCAGTTAGATGATGGTATAAACCCATGCATAAAAATTTACT
GGGTTAAATGTATAGCCAAAGCCAGCATGAATTGTAGAGAGAGGCCAACA
AGTCAGGTCATGAAGCTTGGTACATATCCTTGACAGCTAAGGCAGCTGCT
CTGTACCATGCAGCTGCAGCCATCGCACCAGGGTCAGGAACTGATGCAAG
GATCTCTGGGGAGATATAGGTGGAACGGCCAGCCTGTGCCTGCATGTGCT
TTGTAGATTCAGCTCCGGCTATTGCTGCTTCAGAGGATAAAATGAAGGCA
GTGGAAGGATCAATCCCAGCACTTAACCTCCTCCTGAAGAA
back to top