CN184396

Overview
NameCN184396
Unique NameCN184396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.106e-55
Identity = 105/132 (79.55%), Postives = 117/132 (88.64%), Query Frame = -1
Query:  243 HLGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 638
            HLGADSFL SRD D +Q A+GT+DGIIDTVSA HP+LPL+GLL S GKLV+VGAP+KPLELPV  L+MGRK V+GS  GGMKETQEMIDFAA+HNITADIEVI +DY+NTAMERL KADVRYRFVIDI NTL
Sbjct:  224 HLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTL 355          
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.504e-53
Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = -1
Query:  237 LGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLYA 635
            LGADSF+ SR+P+ +Q AMGTLDGIIDTVSA HP+LPL+GLLKSQGK+++VG PDKPLELPV  L+ GRK ++GS  GGMKETQEMIDFAAKH+I +DIEV+ MDYVNTAMERL K DVRYRFVID+ANTL A
Sbjct:  228 LGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 8.253e-52
Identity = 100/134 (74.63%), Postives = 116/134 (86.57%), Query Frame = -1
Query:  234 LGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLYAT 635
            LGAD+FL SRDP  ++ AMGT+DGIIDTVSA HP+LPL+GLLK++GKLV+VGAP +PLELPV  LI GRK V GS  GG+KETQEM+D A KHNITADIE+IS DYVNTAMERLAKADV+YRFVID+ANT+  T
Sbjct:  223 LGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356          
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.349e-51
Identity = 96/131 (73.28%), Postives = 115/131 (87.79%), Query Frame = -1
Query:  243 LGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 635
            LGAD FL S D D +Q A GTL GIIDTVSA+HP++PL+GLLK  GKLV+VGAP+KPLELPV  L+MGRK ++GS+ GG+KETQEM+DFAA+HNITAD+EVI +DYVNTAMERL K+DVRYRFVID+ANT+
Sbjct:  204 LGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTI 334          
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.192e-50
Identity = 100/131 (76.34%), Postives = 113/131 (86.26%), Query Frame = -1
Query:  243 LGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 635
            LGAD+FL SRDP  ++ AMGT+DGIIDTVSA H +LPL+GLLK +GKLV+VGAP+KPLELPV+ LI  RK V GS  GG+KETQEMID A KHNITADIE+IS DYVNTAMERL KADVRYRFVID+ANTL
Sbjct:  223 LGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTL 353          
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.541e-49
Identity = 95/135 (70.37%), Postives = 114/135 (84.44%), Query Frame = -1
Query:  231 LGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLYATK 635
            LGAD FL S D D ++ AMGT+DGIIDTVSA H I PL+GLLKS GKLVL+GA +KP ++   SLI+GRK+++GS  GGM+ETQEMIDFAA+H I A+IE+ISMDYVNTAM+RLAK DVRYRFVIDI+NTL AT+
Sbjct:  228 LGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAATR 362          
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.485e-48
Identity = 91/132 (68.94%), Postives = 111/132 (84.09%), Query Frame = -1
Query:  243 HLGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 638
            HLGADSFL + DP  ++ A+GT+D IIDT+SAVH + PL+GLLK  GKL+ +G P+KPLELP+  L++GRK V GS  GGMKETQEM+DF AKHNITADIE+I MD +NTAMERLAK+DVRYRFVID+AN+L
Sbjct:  226 HLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357          
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 9.443e-48
Identity = 94/135 (69.63%), Postives = 111/135 (82.22%), Query Frame = -1
Query:  234 HLGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLYAT 638
            +LGADSFL SRDPD ++    TLDGIIDTVSA H I+PL+GLLKS GKLVL+GA +KPLELP   LI+GRK V G+  GG+KETQEMIDF+ KHN+  +IEV+ MDYVN AM+RLAKADV+YRFVID+ANTL  T
Sbjct:  228 NLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 9.443e-48
Identity = 89/132 (67.42%), Postives = 110/132 (83.33%), Query Frame = -1
Query:  243 HLGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 638
            HLG D F+ S DP  +Q A+GTLDGIIDTVSA HPI+PL+ LLK  GKL++VG PDKPL+LPV  LI GR+T++GS  GG+KETQEMIDFAAK+NI AD+EVI +DY+NTAM+RL K+DV+YRFVID+  +L
Sbjct:  226 HLGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSL 357          
BLAST of CN184396 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.747e-47
Identity = 92/131 (70.23%), Postives = 108/131 (82.44%), Query Frame = -1
Query:  243 LGADSFLNSRDPDHLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 635
            LGADSFL + D + ++GA  +LDGIIDTV   HP+ PL  LLK  GKLV+VGAP+KP ELPV SL+ GRK + G+  GG+KETQEM+DFAAKHNITAD+EVI MDYVNTAMERL K+DVRYRFVIDIANT+
Sbjct:  227 LGADSFLLNSDQEQMKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTM 357          
The following BLAST results are available for this feature:
BLAST of CN184396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
MTDH_FRAAN6.106e-5579.55Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MESCR1.504e-5375.94Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH7_ARATH8.253e-5274.63Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_PETCR5.349e-5173.28Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH8_ARATH1.192e-5076.34Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH6_ARATH8.541e-4970.37Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH9_ARATH2.485e-4868.94Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH3_STYHU9.443e-4869.63Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
GEDH1_OCIBA9.443e-4867.42Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_APIGR2.747e-4770.23Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005G23_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184396 ID=CN184396; Name=CN184396; organism=Citrus sinensis; type=EST; length=638bp
CCTTTTTTTGAAGGTCATATGCTAAATATTTTATATGAACAATGTTTTAT
TTCATTAACATTTATAGTTTTTCGGCAATCACGACATAATTAGGGTCGAT
GTAACTGGAAATTAAAAGTAATTTAAGCGCTAAAAGAGTGTAATGATCGA
GGGAGCATTACATATAGCAAAGTGGATCATGGAACAAGGTTGTGAATTGA
AGACATCAATCTGATTCTGATTCTTCAAGGTTTGGTGGCGTACAAGGTGT
TTGCAATATCAATGACAAATCGATACCGAACATCAGCCTTGGCAAGCCTC
TCCATTGCCGTATTGACATAATCCATCGAAATAACCTCAATGTCAGCTGT
TATATTGTGTTTTGCTGCAAAATCAATCATCTCTTGCGTCTCTTTCATTC
CCCCAGTGCTGCTCCCTGACACCGTCTTCCTCCCCATAATTAAGGAAATC
ACAGGTAGCTCGAGTGGCTTGTCCGGAGCACCAACCAGAACAAGCTTGCC
CTGGGACTTTAATAGACCGACCAATGGCAAAATGGGGTGCACAGCGGACA
CCGTGTCAATAATACCATCCAATGTGCCCATAGCACCCTGCAAATGGTCA
GGGTCACGGCTATTCAAAAATGAATCAGCGCCAAGATG
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