CN184395

Overview
NameCN184395
Unique NameCN184395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN184395 vs. ExPASy Swiss-Prot
Match: ANGLT_ROSHC (Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.776e-25
Identity = 70/165 (42.42%), Postives = 97/165 (58.79%), Query Frame = 2 
Query:  281 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGT----------DDYIASVSATAPSVTFHQLPPPVSGLPDTLRSPADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSVLAANLYLPT 745
            D IV Y  PG GHL SMVELGKL+LT+HP FSI I+  TAP   +A             +YI +VSA  P++ FH L P +S LP+ +        L +E   L  P + + L T+  +S+LKA ++D FC+  F V+   L+IPT+Y++T+AG  LA  L +PT
Sbjct:    4 DAIVLYPYPGLGHLISMVELGKLLLTHHPSFSITILASTAPTTIAATAKLVASSNDQLTNYIKAVSADNPAINFHHL-PTISSLPEHIEK----LNLPFEYARLQIPNILQVLQTL--KSSLKALILDMFCDALFDVTKD-LNIPTFYFYTSAGRSLAVLLNIPT 160
The following BLAST results are available for this feature:
BLAST of CN184395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANGLT_ROSHC1.776e-2542.42Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hy... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005G22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005G22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184395 ID=CN184395; Name=CN184395; organism=Citrus sinensis; type=EST; length=748bp
AGGAAGAGACTTAATCGTTTTCCCCAAAATCCTCCTCCACTTGTGAAAGT
TTCTTTAAGCTCCCTTTACTTCAACCAACAATTCTTTGCCCATTTAACCC
TGTAACCTACAGGCTTCCAGTATTTCGTCGTGGGCTTCGATGCATAATTG
CATTGCGATTAGCAAACACAAAGGAGCCCTTTATCACACTCTCATTCTCT
CTCACTATAATTTCTCACCATTTCTACTGTTTTTTTTTTAATATTTTAAC
TTGTAAAATTAAAGATTAAAAAAAATGAAAGATACGATTGTCTTTTATAC
TTCTCCAGGAAGAGGTCACTTAAACTCCATGGTTGAATTAGGAAAATTGA
TACTCACGTACCACCCTTGCTTCTCCATTGACATCATAATCCCCACCGCC
CCGTTCGTATCAAGCGCCGGTACCGATGATTACATCGCCTCCGTCTCCGC
CACAGCTCCCTCCGTTACCTTCCACCAACTCCCTCCTCCGGTTTCCGGCC
TACCCGACACTTTACGTTCACCAGCTGACTTCCCAGCCTTAGTGTACGAG
CTTGGCGAACTCAACAACCCTAAACTCCACGAAACCCTAATAACAATTTC
CAAACGCTCAAACCTCAAAGCCTTTGTTATCGATTTCTTTTGCAACCCCG
CGTTTCAAGTTTCCTCAAGTACTCTCAGTATCCCTACTTACTATTACTTC
ACCACCGCAGGAAGCGTACTCGCTGCTAACCTCTACTTACCAACTCTT
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