EY666403

Overview
NameEY666403
Unique NameEY666403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY666403 vs. ExPASy Swiss-Prot
Match: CI085_HUMAN (Uncharacterized protein C9orf85 OS=Homo sapiens GN=C9orf85 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.686e-18
Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 3 
Query:   93 KHQNRYAWK-PKAGQKINEREVGGKLRPYPEITGVCPRCKDQIDWKRRYGKYKPLSEPAKCQRCTKRAVRQAYHNLCPGCAKEQNVCAKCCSRVDRVI 383
            KHQN +++K  K  + +  +++  KL       GVC RCK+ ++W+ +Y KYKPLS+P KC +C ++ V+ +YH +C  CA E  VCAKC  + D VI
Sbjct:   15 KHQNTFSFKNDKFDKSVQTKKINAKLHD-----GVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKKEDIVI 107
[Close]
BLAST of EY666403 vs. ExPASy Swiss-Prot
Match: CI085_MOUSE (Uncharacterized protein C9orf85 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.921e-17
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 3 
Query:   93 KHQNRYAWK-PKAGQKINEREVGGKLRPYPEITGVCPRCKDQIDWKRRYGKYKPLSEPAKCQRCTKRAVRQAYHNLCPGCAKEQNVCAKCCSRVDRVI 383
            KHQN + +K  K  + +  +++  KL       GVC RCK+ ++W+ +Y KYKPLS+P KC +C ++ V+ +YH +C  CA E  VCAKC  + + VI
Sbjct:   15 KHQNTFTFKNDKFDKSVQTKKINAKLHD-----GVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKKEEIVI 107
[Close]
BLAST of EY666403 vs. ExPASy Swiss-Prot
Match: CI085_RAT (Uncharacterized protein C9orf85 homolog OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.449e-16
Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 3 
Query:   93 KHQNRYAWK-PKAGQKINEREVGGKLRPYPEITGVCPRCKDQIDWKRRYGKYKPLSEPAKCQRCTKRAVRQAYHNLCPGCAKEQNVCAKCCSRVDRVI 383
            KHQN + +K  K  + +  +++  KL       GVC RCK+ ++W+ +Y KYKPLS+P KC +C ++ V+ +YH +C  CA +  VCAKC    + VI
Sbjct:   15 KHQNTFTFKNDKFDKSVQTKKINAKLHD-----GVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACKLEVCAKCGKEEEIVI 107
The following BLAST results are available for this feature:
BLAST of EY666403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CI085_HUMAN7.686e-1841.84Uncharacterized protein C9orf85 OS=Homo sapiens GN... [more]
CI085_MOUSE2.921e-1740.82Uncharacterized protein C9orf85 homolog OS=Mus mus... [more]
CI085_RAT1.449e-1639.80Uncharacterized protein C9orf85 homolog OS=Rattus ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666403 ID=EY666403; Name=EY666403; organism=Citrus sinensis; type=EST; length=863bp
CCCACGCGTCCGCCACCTTGACCTCAAAATTCAAAAGCAAATAAAAAAAG
AAGTAGAAGATGAGCAGCAACAGCAGCAGGCGTGGCGCGCCGAAGCACCA
GAACCGCTACGCCTGGAAGCCGAAAGCTGGCCAGAAGATCAATGAAAGAG
AAGTTGGTGGAAAACTAAGACCCTACCCTGAGATAACGGGAGTATGTCCT
CGATGTAAAGATCAGATTGATTGGAAACGCCGTTATGGCAAATATAAACC
TCTCTCTGAGCCTGCCAAGTGTCAACGTTGTACCAAGCGTGCCGTACGTC
AAGCTTACCATAACCTCTGTCCTGGTTGTGCGAAGGAACAAAATGTATGT
GCAAAGTGTTGTTCCCGCGTGGATCGTGTGATTGGAAGAGACCTTGCAGA
GGTAGAGGCTGAACAAAAGATGCTTGAAGCAGCACTAAAAAATGCTCGAG
AGAGAGATCGAAGAATTCTTCTACGTGCTATGGATAAAGGTAAATCTGAA
AATTCAGCAAAAAATCCAGCCAACAAAAATAAAGTTGGGGAATTATTTCC
TTCCGCATCACTTGAGGAATATGCTGCAAAAAGCAGAGGTGACAAAGACA
ATAACAATGGTGATAACATGGATAAAATCAATGATGAAGATGATGGTGTT
GACGGGGAAACTTGGAGTAATGGTTTTTGATGAAAAGGTGGATGAATATG
TTGCACAATGGTGTCCCAGTGTCGTATTTGGGAACATGCCAACCTTCTTC
TTGGTCGGCTTTAAACAAGCGCGATGAATCAACGTCCTAATAACACAGGC
GATACGCCGCATGTTCTACCCCCTATCTCGGGAAACTGGGGGCTGGCAAA
AAACAACACAAAA
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