CN184386

Overview
NameCN184386
Unique NameCN184386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN184386 vs. ExPASy Swiss-Prot
Match: LINS_ARATH (Linalool synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS14 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34
Identity = 71/106 (66.98%), Postives = 86/106 (81.13%), Query Frame = -2 
Query:  396 SVATILRLGDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQECLSPNPFSASFTRASLNIARMVPLMYSYDDNQRLPRLEEYIKSLL 713
            S ATILRL DDLGSAKDENQDG DGSY+  Y+ E++  T ++A+ H   KIS AWKRLN+ECL+P PFS SF++A LNIAR VPLMYSYDD+QRLP  +EY+KSL+
Sbjct:  466 SAATILRLWDDLGSAKDENQDGTDGSYVECYLNEYKGSTVDEARTHVAQKISRAWKRLNRECLNPCPFSRSFSKACLNIARTVPLMYSYDDDQRLP--DEYLKSLM 569
The following BLAST results are available for this feature:
BLAST of CN184386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LINS_ARATH3.253e-3466.98Linalool synthase, chloroplastic OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005G16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184386 ID=CN184386; Name=CN184386; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTGGCTCACTAATTAAGCTTTATCTTTTTTTATTTTTTTCAATATA
TTTCCGTCATTTCATCGAGGTTTATTTAAAAAAAGTAGAAACAGAAAAGA
AATTATTGATTGGATGGTGCAGACGGTCTGGCCAATCTCCTCCATTGAGA
AATTCTCTAGAAGCCATATCACAATCAAATCCCCTTTTGTCGACTCGAGT
AGAGAGTTTCGTGTTGTGACAAATGGGAAATTACTACACATCCCCTGTAA
GTTGTAATTGAAATGCTGGCATAAAATTGAATATTTCTTCTTGAAGATGC
TGAACATAAGATAAAAGAAACTTCCATAGTATACGTACGTAGGTAAGGAG
CTTTATCACTAACTAGTACACTCCTTGAGTAGGCAAATTATCGAAGAGGA
GGGACTTAATATACTCCTCGAGTCTCGGAAGCCTTTGATTGTCATCATAG
CTATACATCAAAGGAACCATTCTGGCAATGTTAAGAGAAGCCCTTGTGAA
AGATGCTGAAAATGGATTTGGGGAGAGGCATTCCTGGTTTAGGCGCTTCC
ATGCATCTGAAATCTTATCCATAGCATGCTTTTGTGCATCTTCAGCTGTT
ACGTCTTGGTGCTCCATCATGTAGTAATATATGTAAGATCCATCGTTGCC
ATCTTGATTTTCATCCTTAGCACTTCCTAAGTCGTCCCCAAGTCGAAGAA
TTGTTGCGACGGAC
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