CN184381

Overview
NameCN184381
Unique NameCN184381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD2_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Arabidopsis thaliana GN=ARD2 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 5.256e-64
Identity = 118/158 (74.68%), Postives = 130/158 (82.28%), Query Frame = 2
Query:   17 APQDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            A +D REEVIQAWYMDDS+EDQRLPHHKDPKEFVSLD+L+ELGVLSWRLDADNYETDE+L+KIRE RGYSYMDFCEVCPEKLPNYE K+K+FFEEHLHTDEEIRYCVAG+GYFDVRDRNE W   + K +         +         NYIKAMRLF
Sbjct:    4 AVKDGREEVIQAWYMDDSEEDQRLPHHKDPKEFVSLDKLAELGVLSWRLDADNYETDEDLKKIRESRGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGTGYFDVRDRNEAWIRVLVK-KGGMIVLPAGIYHRFTVDSDNYIKAMRLF 160          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD3_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 OS=Arabidopsis thaliana GN=ARD3 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.171e-63
Identity = 116/156 (74.36%), Postives = 129/156 (82.69%), Query Frame = 2
Query:   23 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            +D REEVIQAWYMDDS+EDQRLPHHKDPKEF+SLD+L+ELGVLSWRLDADNYETDE+L+KIRE RGYSYMDFCEVCPEKLPNYE K+K+FFEEHLHTDEEIRYCVAGSGYFDVRDRNE W   +  ++         +         NYIKAMRLF
Sbjct:    6 KDGREEVIQAWYMDDSEEDQRLPHHKDPKEFLSLDKLAELGVLSWRLDADNYETDEDLKKIRESRGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGSGYFDVRDRNEAW-IRVWVKKGGMIVLPAGIYHRFTVDSDNYIKAMRLF 160          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD1_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Arabidopsis thaliana GN=ARD1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 8.683e-59
Identity = 109/158 (68.99%), Postives = 124/158 (78.48%), Query Frame = 2
Query:   17 APQDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            A +D  EEVIQAWY+D+ +EDQ+LPHHKDPKEFVSLD+L+ELGVL WRLDADNYETDEEL++IRE RGYSYMD CEVCPEKLPNYEEK+K FFEEHLH DEEIRYC+AGSGYFDVRD N+ W     K+     F    +         NY+KAMRLF
Sbjct:    4 AAKDQTEEVIQAWYLDNKEEDQKLPHHKDPKEFVSLDKLAELGVLCWRLDADNYETDEELKRIRESRGYSYMDLCEVCPEKLPNYEEKVKMFFEEHLHIDEEIRYCLAGSGYFDVRDLNDIWIRVWVKKGGLIVFPA-GIYHRFTVDSDNYMKAMRLF 160          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. japonica GN=ARD2 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 3.648e-57
Identity = 102/156 (65.38%), Postives = 124/156 (79.49%), Query Frame = 2
Query:   23 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            QD +EEVI+AWYMDDS+EDQRLPHH++PKEF+ L +LSELG+LSWRL+AD++E DE L+KIRE RGYSYMD C+VCPEKLPNYE K+KNFFEEHLHTDEEIRYC+ GSGYFDVRD+N++W   +  ++         +         NYIKAMRLF
Sbjct:    6 QDGKEEVIEAWYMDDSEEDQRLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSYMDICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQW-IRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLF 160          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. indica GN=ARD2 PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 3.648e-57
Identity = 102/156 (65.38%), Postives = 124/156 (79.49%), Query Frame = 2
Query:   23 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            QD +EEVI+AWYMDDS+EDQRLPHH++PKEF+ L +LSELG+LSWRL+AD++E DE L+KIRE RGYSYMD C+VCPEKLPNYE K+KNFFEEHLHTDEEIRYC+ GSGYFDVRD+N++W   +  ++         +         NYIKAMRLF
Sbjct:    6 QDGKEEVIEAWYMDDSEEDQRLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSYMDICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQW-IRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLF 160          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. japonica GN=ARD1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.931e-54
Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 2
Query:   23 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            QD + EVI+AWYMDDS+EDQRLPHH++PKEF+ +D+L+ELGV+SWRL+ DN+E  E L++IRE RGYSY+D C+VCPEKLPNYE KIK+FFEEHLHTDEEIRYC+ GSGYFDVRD+N++W   +  ++         +         NYIKAMRLF
Sbjct:    6 QDGKTEVIEAWYMDDSEEDQRLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQW-IRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLF 160          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. indica GN=ARD1 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 4.931e-54
Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 2
Query:   23 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            QD + EVI+AWYMDDS+EDQRLPHH++PKEF+ +D+L+ELGV+SWRL+ DN+E  E L++IRE RGYSY+D C+VCPEKLPNYE KIK+FFEEHLHTDEEIRYC+ GSGYFDVRD+N++W   +  ++         +         NYIKAMRLF
Sbjct:    6 QDGKTEVIEAWYMDDSEEDQRLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQW-IRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLF 160          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD4_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Arabidopsis thaliana GN=ARD4 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.390e-48
Identity = 88/149 (59.06%), Postives = 113/149 (75.84%), Query Frame = 2
Query:   44 IQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            ++AW+MDDS+EDQRLPHH++PKE VSLD L+ELGVL W+L+ +NYE D EL KIREDRGY YMD  ++CPEK+ NYEEK+KNFF EH+H DEEIRYC+AGSGYFDVRD++++W   +  +  +       +        +NYIK MRLF
Sbjct:    3 LEAWFMDDSNEDQRLPHHRNPKELVSLDYLAELGVLYWKLNPENYENDSELSKIREDRGYDYMDLLDLCPEKVSNYEEKLKNFFTEHIHKDEEIRYCLAGSGYFDVRDKDDRW-IRIWMQPGDLIVLPAGIYHRFTLDASNYIKLMRLF 150          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD3_ORYSJ (Putative 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 OS=Oryza sativa subsp. japonica GN=ARD3 PE=3 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 3.315e-42
Identity = 86/157 (54.78%), Postives = 106/157 (67.52%), Query Frame = 2
Query:   35 EEVIQAWYMDDSD---EDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTI--ALLWIQTNYIKAMRLF 490
            EEV+QAWYMDD D   EDQRLPH + P + + L +L +LG+++ RLDADN+E DE L+ +RE RGY +MD  E+ PEK+PNYE  IK FFEEHLHTDEE+RYC+ GSGYFDVRD N+KW   +    R      +   I         NYIK MRLF
Sbjct:    9 EEVVQAWYMDDDDNAEEDQRLPHRRQPDDLLPLAKLLDLGLVAMRLDADNHEHDENLKIMREQRGYLHMDIVELTPEKMPNYEVMIKRFFEEHLHTDEEVRYCLDGSGYFDVRDENDKW---VRVSVRKGALIVVPAGIYHRFTLDTNNYIKTMRLF 162          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_MOUSE (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Mus musculus GN=Adi1 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 3.665e-41
Identity = 82/150 (54.67%), Postives = 100/150 (66.67%), Query Frame = 2
Query:   41 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            ++QAWYMD+S  D R PH   P   VSL+QL  LGVL W+LDAD YE D EL KIR+ R YS+MD   +C + LPNYEEKIK FFEEHLH DEEIRY + GSGYFDVRD+ +KW   +  E+ +       +       + NY+KAMRLF
Sbjct:    1 MVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKW-IRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLF 149          
The following BLAST results are available for this feature:
BLAST of CN184381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ARD2_ARATH5.256e-6474.681,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD3_ARATH1.171e-6374.361,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ARATH8.683e-5968.991,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ORYSJ3.648e-5765.381,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ORYSI3.648e-5765.381,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ORYSJ4.931e-5462.181,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ORYSI4.931e-5462.181,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD4_ARATH1.390e-4859.061,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD3_ORYSJ3.315e-4254.78Putative 1,2-dihydroxy-3-keto-5-methylthiopentene ... [more]
MTND_MOUSE3.665e-4154.671,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005G13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184381 ID=CN184381; Name=CN184381; organism=Citrus sinensis; type=EST; length=490bp
TTCATAAACCATGGTCGCCCCTCAGGATCCTAGAGAGGAAGTTATTCAGG
CATGGTACATGGATGATAGTGATGAAGATCAAAGACTCCCCCATCACAAG
GATCCAAAGGAATTTGTGTCCCTGGACCAGCTTTCTGAACTTGGAGTACT
CAGCTGGCGATTAGATGCTGATAACTATGAAACTGATGAGGAACTGAGGA
AGATTCGTGAAGATCGCGGATATTCTTACATGGACTTTTGCGAGGTTTGC
CCAGAAAAACTGCCAAATTATGAAGAGAAGATCAAAAACTTTTTCGAAGA
ACATCTTCATACAGATGAAGAGATCCGCTACTGTGTGGCAGGAAGTGGTT
ACTTTGATGTCAGGGACCGTAATGAAAAATGGAATTCGCATATGGGTAAA
GAAAGGAGGAATGATTGTTTTACCTGCTTGGATGTTACCATCGCTTTACT
TTGGATACAGACAAACTATATCAAGGCTATGCGTCTGTTT
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