EY666399

Overview
NameEY666399
Unique NameEY666399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PDC_SOLTU (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.146e-43
Identity = 111/239 (46.44%), Postives = 144/239 (60.25%), Query Frame = 3
Query:  105 LSPCSSSSK-------HYKTQLF-SDFIVVPRKSCFSTWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSLAGKPLANDHSEPQEIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCENKMDQFLEEMLLPFRSGK-ALKDHFEKLNTHFETTNRAGSLSEHGTFINQYLPKISWGKVEKAAYPQTST 794
            L+PCSSSS        H  T  F   F  +P ++    WVS + SRI  RKHF++ SSNG PLNAVS+QD               ++  +   S +   +T+SITV+GASGDLAKKKI PALFAL+YEDCLPE+F VFGY+RTKL+DEELRNMIS TLTCRIDK+ENC+ KM+ FLE     + SG+   +D F +L+  ++   + G    +  F     P I    V  A+   +ST
Sbjct:    7 LNPCSSSSAATSPSTFHNGTPYFCKKFNFLPFRTQPLNWVSGIYSRIQPRKHFEVFSSNGFPLNAVSVQDV--------------QVPLTELGSGD---TTVSITVIGASGDLAKKKILPALFALFYEDCLPENFVVFGYSRTKLSDEELRNMISTTLTCRIDKRENCDAKMEHFLERCF--YHSGQYNSEDDFAELD--YKLKEKEGCRVSNRLFYLSIPPNIFVDVVRCASLKASST 224          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD1_ARATH (Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.302e-40
Identity = 108/210 (51.43%), Postives = 128/210 (60.95%), Query Frame = 3
Query:  108 SPCSSSSK--------HYKTQLFSDFIVVPRKSCFSTWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSLAGKPLANDHSEPQEIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCENKMDQFLEEMLLPFRSGK-ALKDHFEKLNTHFETTNRAGSLS 710
            SP SSSS              LFS  +  PRKS FS    QV+ R  A KH QL +SNG   N  SLQDS  G  L  +H    E             STLSITVVGASGDLAKKKIFPALFAL+YE CLP+DF+VFGYARTKLT EELR+MIS TLTCRID++E C +KM+QFL+     + SG+   ++ F +LN   +    AG +S
Sbjct:   10 SPSSSSSSLATAASPFKETLPLFSRSLTFPRKSLFS----QVRLRFFAEKHSQLDTSNGCATNFASLQDS--GDQLTEEHVTKGE-------------STLSITVVGASGDLAKKKIFPALFALFYEGCLPQDFSVFGYARTKLTHEELRDMISSTLTCRIDQREKCGDKMEQFLKRCF--YHSGQYNSEEDFAELNKKLK-EKEAGKIS 197          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PDC_SPIOL (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.707e-37
Identity = 77/121 (63.64%), Postives = 94/121 (77.69%), Query Frame = 3
Query:  252 SNGHPLNAVSLQDSLAGKPLANDHSEPQ-EIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCENKMDQFLE 611
            SNGHPLN VSLQ+ +A  P+     +P  +++      S K   TLSI VVGASGDLAKKKIFPALFAL+YE+CLPE+FTVFG++RT++ DEELR MISKTLTCRID++ENC  KMD FL+
Sbjct:   42 SNGHPLNDVSLQNDVAVNPIVAKSIDPSADLQLLPLLESVKEEPTLSIIVVGASGDLAKKKIFPALFALFYENCLPENFTVFGFSRTEMNDEELRTMISKTLTCRIDQRENCGEKMDHFLQ 162          

HSP 2 Score: 23.8682 bits (50), Expect = 1.707e-37
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  607 LKRCFYHSG 633
            L+RCFYHSG
Sbjct:  161 LQRCFYHSG 169          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PDC_TOBAC (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.334e-36
Identity = 92/191 (48.17%), Postives = 115/191 (60.21%), Query Frame = 3
Query:  213 SRIHARKHFQLKSSNGHPLNAVSLQDSLAGKPLANDHSE---------------PQEIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCENKMDQFLEEMLLPFRSGKALKDHFEKLNTHFETTNRAGSLSEH--GTFINQ 734
            S I +RK   L+ +     NAV +QD     P +   +E               P+E + ++   S K  ST+SITVVGASGDLAKKKIFPALFALYYE CLPE FT+FGYAR+K+TD ELRNM+SKTLTCRIDK+ENC  KM+QFLE     + SG+     ++ L    E   +   L EH  G F N+
Sbjct:   38 SSILSRKFGSLQINQKPFWNAVRMQDGAVATPPSKIENETPLKKLKNGILPVAPPKEQKDTIDFDSNKAKSTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYARSKMTDAELRNMVSKTLTCRIDKRENCGEKMEQFLERCF--YHSGQ-----YDSLENFAELDKK---LKEHEAGRFSNR 218          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD2_ARATH (Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g13110 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.797e-32
Identity = 74/134 (55.22%), Postives = 99/134 (73.88%), Query Frame = 3
Query:  336 EIEASVTASSEKVG--------STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCENKMDQFLEEMLLPFRSGK-ALKDHFEKLNTHFETTNRAGSLS 710
            E+ ++++  + KVG        ST+SITVVGASGDLAKKKIFPALFALYYE CLPE FT+FGY+R+K+TD ELRNM+SKTLTCRIDK+ NC  KM++FL+     + SG+   ++HF +L+   +  + AG +S
Sbjct:   86 EVLSALSQEAAKVGVESDGQSQSTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYSRSKMTDVELRNMVSKTLTCRIDKRANCGEKMEEFLKRCF--YHSGQYDSQEHFTELDKKLK-EHEAGRIS 216          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD3_ARATH (Glucose-6-phosphate 1-dehydrogenase 3, chloroplastic OS=Arabidopsis thaliana GN=At1g24280 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 86/199 (43.22%), Postives = 124/199 (62.31%), Query Frame = 3
Query:  126 SKHYKTQLFSDFIVVPRKSCFSTWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQD-SLAGKPLANDHSEPQEIEASVTASSEKVG---------STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCENKMDQFLEEMLLPFRSGK-ALKDHF----EKLNTH 677
            S H+ + L +  +V PR+S    + S     ++  +   ++S      ++V +QD S+A +  +++ ++   +    +  ++KV          ST+SITVVGASGDLAKKKIFPALFALYYE CLPE FT+FGYAR+K+TD ELR M+SKTLTCRIDK+ NC  KM++FL+     + SG+   ++HF    EKL  H
Sbjct:   21 SNHHHSSLIN--VVDPRRSLSFHYASP--QGLNLAELCVVRSQRRSVQSSVVVQDGSVATESSSSEEAKDVGVLTIPSLEADKVVAESDGGEQLSTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYARSKMTDAELRVMVSKTLTCRIDKRANCGEKMEEFLKRCF--YHSGQYDSQEHFVALDEKLKEH 213          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD4_ARATH (Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.015e-21
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 3
Query:  330 PQEIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCENKMDQF 605
            P   + S   S  +  ++L I VVGA+G+LA+ KIFPALFALYY   LPED  +FG +R  LTDE+LR++I+ TLTCR+D +ENC  KMD F
Sbjct:  136 PVSKQLSDDLSDVRRRASLCIAVVGATGELARGKIFPALFALYYSGYLPEDVAIFGVSRKNLTDEDLRSIIASTLTCRVDHQENCGGKMDAF 227          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD_MEDSA (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.959e-12
Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 3
Query:  381 TLSITVVGASGDLAKKKIFPALFALYYEDCLPED-FTVFGYARTKLTDEELRNMISKTL 554
            TLSI V+GASGDLAKKK FPALF LY ++ LP D   +FGYAR+K++D+ELRN +   L
Sbjct:   29 TLSIVVLGASGDLAKKKTFPALFHLYKQELLPPDEVHIFGYARSKISDDELRNKLRSYL 87          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD_SCHPO (Glucose-6-phosphate 1-dehydrogenase OS=Schizosaccharomyces pombe GN=zwf1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12
Identity = 43/120 (35.83%), Postives = 71/120 (59.17%), Query Frame = 3
Query:  387 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKEN-CENKMDQFLEEMLLPFRSGKALKDHFEKLNTHFETTNRAGSLSEHGTFINQYLP 743
            ++ V GASGDL+KKK FPALF+L+ E  LP+D  + GYAR+K+  E+  + I++ +  +ID++++  + K+++F ++    +R      + FE LN+H     R G  S H       LP
Sbjct:   13 AMVVFGASGDLSKKKTFPALFSLFSEGRLPKDIRIVGYARSKIEHEDFLDRITQNI--KIDEEDSQAKEKLEEF-KKRCSYYRGSYDKPEDFEGLNSHL--CEREGDRSTHNRIFYLALP 127          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD_DICDI (Glucose-6-phosphate 1-dehydrogenase OS=Dictyostelium discoideum GN=g6pd-1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12
Identity = 45/101 (44.55%), Postives = 59/101 (58.42%), Query Frame = 3
Query:  378 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCENKMDQFLEEMLLPFRSG----KALKDHFEKL 668
            S L++ ++GASGDLAKKK +PALF LY  D LP +  ++GYAR+ +   + +  ISK L       +  E K  QFL   LL + SG    KA  D FEKL
Sbjct:    9 SVLTVIILGASGDLAKKKTYPALFGLYLRDLLPSNTIIYGYARSHIEIGDFKARISKGL-------KGDEEKKKQFLN--LLHYHSGKYDEKASYDEFEKL 100          
The following BLAST results are available for this feature:
BLAST of EY666399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
G6PDC_SOLTU2.146e-4346.44Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD1_ARATH1.302e-4051.43Glucose-6-phosphate 1-dehydrogenase 1, chloroplast... [more]
G6PDC_SPIOL1.707e-3763.64Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PDC_TOBAC4.334e-3648.17Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD2_ARATH3.797e-3255.22Glucose-6-phosphate 1-dehydrogenase 2, chloroplast... [more]
G6PD3_ARATH4.198e-3143.22Glucose-6-phosphate 1-dehydrogenase 3, chloroplast... [more]
G6PD4_ARATH3.015e-2154.35Glucose-6-phosphate 1-dehydrogenase 4, chloroplast... [more]
G6PD_MEDSA1.959e-1262.71Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]
G6PD_SCHPO3.341e-1235.83Glucose-6-phosphate 1-dehydrogenase OS=Schizosacch... [more]
G6PD_DICDI3.341e-1244.55Glucose-6-phosphate 1-dehydrogenase OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666399 ID=EY666399; Name=EY666399; organism=Citrus sinensis; type=EST; length=809bp
CCACGCGTCCGCACAAACCATAAACGTAGTCCATATACACACGCTTGTTC
AGTCTTTTAACTTCTTCACTCCTCTTGATCCATAACTGCATGGCTACTGC
ACATTTGAGTCCTTGCTCTTCTTCATCGAAGCATTACAAGACGCAACTCT
TTAGCGACTTCATTGTTGTCCCAAGAAAATCTTGTTTCTCCACTTGGGTA
TCTCAAGTTCAGTCAAGAATCCATGCTAGAAAGCATTTTCAGCTCAAATC
CTCTAATGGGCATCCTCTTAATGCTGTTTCTTTGCAAGATAGTTTAGCTG
GAAAACCTCTGGCCAACGATCATTCCGAGCCTCAAGAGATAGAGGCCTCC
GTTACTGCATCATCTGAAAAAGTGGGTTCTACACTCAGCATAACAGTTGT
TGGAGCCTCAGGAGACCTTGCAAAGAAGAAGATTTTTCCTGCACTTTTCG
CCCTATACTATGAAGACTGTCTACCTGAGGATTTTACAGTTTTTGGTTAT
GCTCGGACTAAATTGACTGATGAGGAGCTGAGGAACATGATTAGCAAAAC
TTTAACTTGTAGAATTGATAAGAAGGAAAATTGTGAAAACAAAATGGATC
AGTTCCTTGAAGAGATGCTTTTACCATTCCGGTCTGGTAAAGCTCTGAAG
GACCATTTTGAAAAATTAAACACGCACTTCGAAACGACAAACAGGGCTGG
AAGCCTCTCCGAACACGGAACTTTCATTAACCAATACCTCCCGAAGATTT
CTTGGGGGAAGGTAGAGAAAGCCGCCTACCCTCAAACGTCCACCCCCCAC
CCGGCTTGC
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