CN184315

Overview
NameCN184315
Unique NameCN184315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 3.872e-71
Identity = 110/131 (83.97%), Postives = 115/131 (87.79%), Query Frame = 1
Query:    1 TVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            +VGGQPAGRIVMELFAD TPRTAENFRALCTGEKG G+SGKPLHYK SSFHRVIPGFMCQ            ESIYG+KFADENF+KKHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFGQVVE
Sbjct:   11 SVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVE 141          

HSP 2 Score: 55.8398 bits (133), Expect = 3.872e-71
Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 487
            +GMDVVKAIEKVGSSSGRT K VV+ DCGQLS
Sbjct:  141 EGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.078e-69
Identity = 108/131 (82.44%), Postives = 115/131 (87.79%), Query Frame = 1
Query:    1 TVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            T+GG PAGR+VMELFAD TP+TAENFRALCTGEKGVGK GKPLHYKGS+FHRVIPGFMCQ            ESIYG+KF DENFVKKHTGPGILSMANAGPGTNGSQFF+CTAKTEWL+GKHVVFGQVVE
Sbjct:   11 TIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVE 141          

HSP 2 Score: 51.9878 bits (123), Expect = 2.078e-69
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 484
            +GMDV+K  E VGSSSGR +KPVVIADCGQL
Sbjct:  141 EGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.586e-66
Identity = 102/130 (78.46%), Postives = 112/130 (86.15%), Query Frame = 1
Query:    4 VGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            + G PAGRIVMEL+AD TPRTAENFRALCTGEKGVG+SGKPLHYKGS+FHRVIP FMCQ            ESIYG+KFADENF+K+HTGPGILSMANAG GTNGSQFF+CT KTEWLDGKHVVFG+V+E
Sbjct:   12 IAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIE 141          

HSP 2 Score: 51.6026 bits (122), Expect = 1.586e-66
Identity = 23/32 (71.88%), Postives = 29/32 (90.62%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 487
            +GM+VV+ IEKVGS SG+T++PV IADCGQLS
Sbjct:  141 EGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 4.585e-66
Identity = 103/131 (78.63%), Postives = 109/131 (83.21%), Query Frame = 1
Query:    1 TVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            TVGG+ AGRIVMEL+AD TP TAENFRALCTGE+G+GK GKPLHYKGSSFHRVIP FMCQ            ESIYGSKF DENF+KKHTGPGILSMANAG  TNGSQFF+CT KT WLDGKHVVFGQVVE
Sbjct:   12 TVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVE 142          

HSP 2 Score: 53.5286 bits (127), Expect = 4.585e-66
Identity = 24/32 (75.00%), Postives = 30/32 (93.75%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 487
            +G++VV+ IEKVGS SGRT+KPVVIADCGQ+S
Sbjct:  142 EGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 5.981e-66
Identity = 101/131 (77.10%), Postives = 108/131 (82.44%), Query Frame = 1
Query:    1 TVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            T+ GQPAGRIVMEL+ D TPRTAENFRALCTGEKGVG +GKPLH+KGS FHRVIP FMCQ            ESIYGSKF DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVE
Sbjct:   11 TIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVE 141          

HSP 2 Score: 56.9954 bits (136), Expect = 5.981e-66
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 487
            +G+DVVKAIEKVGSSSG+  KPVV+ADCGQLS
Sbjct:  141 EGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.017e-65
Identity = 100/131 (76.34%), Postives = 110/131 (83.97%), Query Frame = 1
Query:    1 TVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            T+GG PAG+IVMEL+ D TP+TAENFRALCTGEKGVG+SGKPLH+KGSSFHRVIP FMCQ            ESIYG+KF DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVE
Sbjct:   12 TIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVE 142          

HSP 2 Score: 55.0694 bits (131), Expect = 1.017e-65
Identity = 24/32 (75.00%), Postives = 30/32 (93.75%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 487
            +G+DVVKAIEK+GSSSG+  KPVVIADCG++S
Sbjct:  142 EGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.010e-62
Identity = 97/131 (74.05%), Postives = 106/131 (80.92%), Query Frame = 1
Query:    1 TVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            ++ G P GRI MELFAD TP TAENFRALCTGEKG+GK GKPLH+KGS FHRVIPGFMCQ            ESIYG+KF DENF+KKHTG GILSMAN+GP TNGSQFF+CT KT WLDGKHVVFGQVV+
Sbjct:   11 SLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVK 141          

HSP 2 Score: 53.5286 bits (127), Expect = 1.010e-62
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 487
            KG+DVVKAIEKVGS SG+T+K V I DCGQLS
Sbjct:  141 KGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 1.717e-62
Identity = 100/131 (76.34%), Postives = 106/131 (80.92%), Query Frame = 1
Query:    1 TVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            TVG + AGRIVMEL+AD  P TAENFRALCTGE+G+GKSGKPLHYKGS+FHRVIP FMCQ            ESIYG KF DENFVKKHTGPGILSM NAG  TNGSQFF+CT KT WLDGKHVVFGQVVE
Sbjct:   11 TVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVE 141          

HSP 2 Score: 49.2914 bits (116), Expect = 1.717e-62
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 484
            +GMDVV+ IEKVGS SGRT+K VV  DCGQL
Sbjct:  141 EGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.871e-61
Identity = 98/131 (74.81%), Postives = 105/131 (80.15%), Query Frame = 1
Query:    1 TVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            TVGG PAGRIVMEL+A+  P+TAENFRALCTGEKGVGKSGKPLHYKGS+FHRVIP FMCQ            ESIYG KF DE FV+K   PG+LSMANAGP TNGSQFF+CT  T WLDGKHVVFGQVVE
Sbjct:   11 TVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVE 141          

HSP 2 Score: 49.6766 bits (117), Expect = 1.871e-61
Identity = 23/32 (71.88%), Postives = 28/32 (87.50%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 487
            +GMDVVKAIEKVG+ +G T+K V +ADCGQLS
Sbjct:  141 EGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.567e-60
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 1
Query:   34 MELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            MELF DV P+TAENFRALCTGEKG+G   KPLHYKGSSFHRVIPGFMCQ            ESIYG+KF DENF+KKHTGPG+LSMANAGPGTNGSQFF+CT KT WLDGKHVVFGQVVE
Sbjct:    1 MELFQDVVPQTAENFRALCTGEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVE 119          

HSP 2 Score: 55.4546 bits (132), Expect = 1.567e-60
Identity = 26/32 (81.25%), Postives = 29/32 (90.62%), Query Frame = 2
Query:  392 KGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 487
            +GMDVV+AIEKVGS SG+T KPV IADCGQLS
Sbjct:  119 EGMDVVRAIEKVGSQSGQTKKPVKIADCGQLS 150          
The following BLAST results are available for this feature:
BLAST of CN184315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
CYPH_CATRO3.872e-7183.97Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_SOLLC2.078e-6982.44Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_LUPLU1.586e-6678.46Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP19A_ARATH4.585e-6678.63Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CP18C_ARATH5.981e-6677.10Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CP19B_ARATH1.017e-6576.34Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CP18D_ARATH1.010e-6274.05Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CYPH_BRANA1.717e-6276.34Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CYPH_MAIZE1.871e-6174.81Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CYPH_ALLCE1.567e-6078.33Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005F01_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184315 ID=CN184315; Name=CN184315; organism=Citrus sinensis; type=EST; length=521bp
ACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTGATGGAGCTCTTCGCCGA
TGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGA
AAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACTACAAAGGCTCGTCCTTC
CACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGG
AAACGGAACCGGAGGCGAATCAATCTACGGCTCGAAATTCGCCGATGAGA
ACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCC
GGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGA
GTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAAGGGATG
GACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGCAGGACCAA
CAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCAT
GATAATGATCGCCATCATCAC
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