EY666392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666392 vs. ExPASy Swiss-Prot
Match: SPTC1_PONAB (Serine palmitoyltransferase 1 OS=Pongo abelii GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 9.199e-26 Identity = 61/159 (38.36%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 3 RGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFXXXXXXXXXXXXITAIDVLEENPDLITKLKINTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIR 479 RG+TEH G+ +D ID+++A M +ALA+ GGFC G + V+DHQRLS GY F I A++++EENP + LK + L I GL + P SP L LE+STGS + D++LL++I D + +KC P IR Sbjct: 287 RGVTEHYGINIDDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPGIFAVLKEKCRQIHKALQGISGLKVVGEPLSPAFHLQLEESTGSREQDVRLLQEIVDQCMNRSIALTQARYLEKEEKCLPPPSIR 445
BLAST of EY666392 vs. ExPASy Swiss-Prot
Match: SPTC1_MOUSE (Serine palmitoyltransferase 1 OS=Mus musculus GN=Sptlc1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.569e-25 Identity = 61/159 (38.36%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 3 RGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFXXXXXXXXXXXXITAIDVLEENPDLITKLKINTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIR 479 RG+TEH G+ +D ID+++A M +ALA+ GGFC G + VVDHQRLS GY F I A++++EENPD+ LK + L + GL + SP + L LE+STGS + D++LL+ I D + + +KC P IR Sbjct: 287 RGVTEHYGISIDDIDLISANMENALASVGGFCCGRSFVVDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPDIFAVLKKKCQNIHKSLQGVSGLKVVGESLSPALHLQLEESTGSREKDVKLLQAIVDQCMDKGIALTQARYLDKEEKCLPPPSIR 445
BLAST of EY666392 vs. ExPASy Swiss-Prot
Match: SPTC1_HUMAN (Serine palmitoyltransferase 1 OS=Homo sapiens GN=SPTLC1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 5.962e-25 Identity = 60/159 (37.74%), Postives = 85/159 (53.46%), Query Frame = 3 Query: 3 RGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFXXXXXXXXXXXXITAIDVLEENPDLITKLKINTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIR 479 RG+TEH G+ +D ID+++A M +ALA+ GGFC G + V+DHQRLS GY F I A++++EENP + LK + L I GL + SP L LE+STGS + D++LL++I D + +KC P IR Sbjct: 287 RGVTEHYGINIDDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPGIFAVLKEKCGQIHKALQGISGLKVVGESLSPAFHLQLEESTGSREQDVRLLQEIVDQCMNRSIALTQARYLEKEEKCLPPPSIR 445
BLAST of EY666392 vs. ExPASy Swiss-Prot
Match: SPTC1_CRIGR (Serine palmitoyltransferase 1 OS=Cricetulus griseus GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 5.962e-25 Identity = 61/159 (38.36%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 3 RGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFXXXXXXXXXXXXITAIDVLEENPDLITKLKINTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIR 479 RG+TEH G+ +D ID+++A M +ALA+ GGFC G + VVDHQRLS GY F I A++++EENP + LK + L I GL + SP + L LE+STGS + D+QLL+++ + E +KC P IR Sbjct: 287 RGVTEHYGISIDDIDLISANMENALASVGGFCCGRSFVVDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPGIFAVLKKKCQHIHKSLQGISGLKVVGESLSPALHLQLEESTGSREKDVQLLQEMVIHCMNEGIALTQARYLDKEEKCLPPPSIR 445
BLAST of EY666392 vs. ExPASy Swiss-Prot
Match: SPTC1_MACFA (Serine palmitoyltransferase 1 OS=Macaca fascicularis GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.017e-24 Identity = 60/159 (37.74%), Postives = 85/159 (53.46%), Query Frame = 3 Query: 3 RGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFXXXXXXXXXXXXITAIDVLEENPDLITKLKINTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIR 479 RG+TEH G+ +D ID+++A M +ALA+ GGFC G + V+DHQRLS GY F I A++++EENP + LK + L I GL + SP L LE+STGS + D++LL++I D + +KC P IR Sbjct: 287 RGVTEHYGINIDDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPGIFAVLKEKCRQIHKALQGISGLKVVGESLSPAFHLQLEESTGSREQDVRLLQEIVDQCMDRSIALTQARYLEKEEKCLPPPSIR 445
BLAST of EY666392 vs. ExPASy Swiss-Prot
Match: SPTC1_BOVIN (Serine palmitoyltransferase 1 OS=Bos taurus GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.170e-22 Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 3 RGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFXXXXXXXXXXXXITAIDVLEENPDLITKLKINTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDI 389 RG+TEH G+ +D ID+++A M ++LA+ GGFC G + V+DHQRLS GY F I A++++EENP + LK + L I GL + SP + L LE++TG + D++LL++I Sbjct: 287 RGVTEHFGISIDDIDLISANMENSLASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPGIFAVLKEKCKRIHKALQGIPGLKVVGESISPALHLQLEETTGCRERDVKLLQEI 415
BLAST of EY666392 vs. ExPASy Swiss-Prot
Match: SPTC1_DICDI (Serine palmitoyltransferase 1 OS=Dictyostelium discoideum GN=sptA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.683e-17 Identity = 60/158 (37.97%), Postives = 87/158 (55.06%), Query Frame = 3 Query: 3 RGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFXXXXXXXXXXXXITAIDVLEENPDLITKLKINTAILRTGLSD---IHG-LSIASNPESPIVFLIL--EKSTGSMK-NDLQLLEDIADWALKEDGVFVVTSKRSMLDK 455 RGLTEH + + +DI+T + G++ ++ GGFC GS VV HQRL+ GYVF AI++LEENP ++ L N L GL+ ++G L I S P SP++ L L KS S + ND LL+ I D A+ + G+ + +K +K Sbjct: 285 RGLTEHYNIDTNLVDILTGSYGNSFSSGGGFCCGSPEVVYHQRLNGVGYVFSASLPPFLACSSTKAIEMLEENPKMLEMLHSNIGELYQGLNKSGALNGLLEITSLPISPVIHLSLLDSKSNKSNRINDELLLQKIVDKAM-DYGLLLTRAKYVSAEK 441
BLAST of EY666392 vs. ExPASy Swiss-Prot
Match: LCB1_SCHPO (Serine palmitoyltransferase 1 OS=Schizosaccharomyces pombe GN=lcb1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.077e-14 Identity = 48/161 (29.81%), Postives = 81/161 (50.31%), Query Frame = 3 Query: 3 RGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFXXXXXXXXXXXXITAIDVL-EENPDLITKLKINTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR-SMLDKCRLPVGIR 479 +GLTEH GVP ++I+ ++ +LA GGFC GS +V+HQRLS Y++ AI +L + ++ L+ +A+ LS +S+ ESPI+ L + S + LLE+I + + E G + +KR L++ ++ +R Sbjct: 314 KGLTEHFGVPPTDVEIIIGSLTTSLAGGGGFCAGSELMVEHQRLSGMAYIYSAALPASLAVAAYEAISILSRDGGSMLNDLRSKSALFHAKLSRNKFFETSSDIESPIIHLRFKDKDISHDKQVFLLEEIVELCIAE-GFLIARAKRVESLERVKVQPSLR 473 The following BLAST results are available for this feature:
BLAST of EY666392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY666392 ID=EY666392; Name=EY666392; organism=Citrus sinensis; type=EST; length=479bpback to top |