EY666391

Overview
NameEY666391
Unique NameEY666391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_TRIEI (Trigger factor OS=Trichodesmium erythraeum (strain IMS101) GN=tig PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.984e-22
Identity = 64/211 (30.33%), Postives = 112/211 (53.08%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESN-VQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQL----------YGAQLLQMQAGMKLNEQQ 600
            L  R   +G+L  +  R  ++GD+AIVD       E E    Q +P  + + F  D ++G + +PGF++ I G++  ETK     FP  + + +L G    FTV  +EL  ++LP+LDD LA + +    TI++++E L QK  + ++    Q  + AI+D+L   +E++IP++L + + +Q+          YG  + +  +  KL E Q
Sbjct:  148 LEERRSRMGTLIPIEGRAAEMGDVAIVDFVGIIPSETEGEEAQEVPGGKAQDFQMDLKEG-QFIPGFIEGIVGMKLQETKEISAQFPSEYSEANLAGKPVVFTVTLKELKEKELPELDDDLAQE-ISEFETIDKLREFLEQKFTKEKEEKTKQNKEKAIIDELVTHLEVEIPETLIKNEVQQMLAQSAMDLSQYGIDVKEFFSSEKLPEMQ 356          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_SYNP6 (Trigger factor OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tig PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.308e-20
Identity = 55/178 (30.90%), Postives = 96/178 (53.93%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ 534
            L  + K + +L  V  R   +GD+A++D     ++  E     IP      F  + E+ D+ +PGF+  I G+   ET++    FPE++ QE + G  AQFT+  +EL  RDLP+LDD+ A +      TIE++K  L ++ +   ++    +  +AIL  L   ++++IP+SL + +
Sbjct:  150 LAEQQKQMATLVPVEGRNAAIGDVAVIDFQGILVESGEE----IPGGSGTDFQIEVEE-DRFIPGFISGIVGMAIEETRTVDATFPETYAQEEVAGKAAQFTITLKELKTRDLPELDDAFAQE-ASQYETIEELKTALTERFQAEHESEVKASKRDAILTALADQLDVEIPESLLQRE 321          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_SYNE7 (Trigger factor OS=Synechococcus elongatus (strain PCC 7942) GN=tig PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.308e-20
Identity = 55/178 (30.90%), Postives = 96/178 (53.93%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ 534
            L  + K + +L  V  R   +GD+A++D     ++  E     IP      F  + E+ D+ +PGF+  I G+   ET++    FPE++ QE + G  AQFT+  +EL  RDLP+LDD+ A +      TIE++K  L ++ +   ++    +  +AIL  L   ++++IP+SL + +
Sbjct:  150 LAEQQKQMATLVPVEGRNAAIGDVAVIDFQGILVESGEE----IPGGSGTDFQIEVEE-DRFIPGFISGIVGMAIEETRTVDATFPETYAQEEVAGKAAQFTITLKELKTRDLPELDDAFAQE-ASQYETIEELKTALTERFQAEHESEVKASKRDAILTALADQLDVEIPESLLQRE 321          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_NOSP7 (Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tig PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.085e-19
Identity = 62/205 (30.24%), Postives = 108/205 (52.68%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDIS---ATTIDEDES-NVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQMQAGMKLNEQQL 603
            L +  + L +L  V  R  Q+GDIA+VD     A    EDE+  ++ IP AE   F  + ++ DK +PGF+  I G+   ET+     FP+ +  E L G  A F V  +EL  ++LP+++D  A + +    T+E+++ +L+++ ++            A+L +L K VE+D+P +L E++         +  Q  M+L++Q L
Sbjct:  148 LEKERQELATLIPVEGRSAQIGDIAVVDFKGSFAKAEGEDETAELEPIPGAEATDFQVELQE-DKFIPGFISGIVGMNPEETREIAAQFPDPYANEDLAGKAATFIVTLKELKEKELPEINDDFAQE-ISDFETLEELRASLVERYQKEADDKTKTNKQEALLTELLKHVEVDLPLTLVEQE------VDAMLTQTAMRLSQQGL 344          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_ANAVT (Trigger factor OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tig PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.085e-19
Identity = 57/205 (27.80%), Postives = 109/205 (53.17%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVD----ISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQMQAGMKLNEQQL 603
            L +  + L +L  V  R  Q+GD+A+VD    I+    D++ +  + IP  +   F  + ++ DK +PGF+  I G+  G+TK     FP+ +  + L G  A FTV  +E+  ++LP+L+D  A + +    T+E ++ +L ++ ++  +         A+L +L K +E+D+P++L E++         +  Q  M+L++Q L
Sbjct:  148 LEKERQELATLIPVEGRAAQIGDVAVVDFKGVIAKAEGDDENAEPEPIPGGDASDFQVELQE-DKFIPGFVTGIVGMNPGDTKEVSAQFPDPYVNQELAGKPAIFTVTLKEIKEKELPELNDDFAQE-VSDFDTLEALRASLAERYQKEAEDKTKNNQQEALLGELVKHIEVDLPETLIEKE------VDAMLTQTAMRLSQQGL 344          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_ANASP (Trigger factor OS=Anabaena sp. (strain PCC 7120) GN=tig PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.417e-19
Identity = 56/205 (27.32%), Postives = 109/205 (53.17%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVD----ISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQMQAGMKLNEQQL 603
            L +  + L +L  V  R  Q+GD+A+VD    I+    D++ +  + IP  +   F  + ++ D+ +PGF+  I G+  G+TK     FP+ +  + L G  A FTV  +E+  ++LP+L+D  A + +    T+E ++ +L ++ ++  +         A+L +L K +E+D+P++L E++         +  Q  M+L++Q L
Sbjct:  148 LEKERQELATLIPVEGRSAQIGDVAVVDFKGVIAKAEGDDENAEPEPIPGGDASDFQVELQE-DRFIPGFVTGIVGMNPGDTKEVSAQFPDPYVNQELAGKPAIFTVTLKEIKEKELPELNDDFAQE-VSDFDTLEALRASLAERYQKEAEDKTKNNQQEALLGELVKHIEVDLPETLIEKE------VDAMLTQTAMRLSQQGL 344          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.123e-19
Identity = 60/200 (30.00%), Postives = 102/200 (51.00%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTI-DEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLL-PGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQM-QAGMKLN 591
            L ++ + L +L  V DR  Q+GD+AI D     + D  E     IP  + + F  D E+G K +PGF+D   G++  ETK F + FPE +  E + G Q  FTV  +EL  R+LP+LDD  A +       T+   +E+L  + +E  + +   +    +L+QL      ++P+    E+   +   Q+++  + G+ +N
Sbjct:  148 LTQKQRELATLVPVEDRAAQMGDVAIADYEGRYVNDAGEEEEDIIPGTQAEDFSLDLEEG-KFIPGFVDGFVGMKPEETKKFTVTFPEDYGNEEMAGKQVSFTVTLKELKSRELPELDDEFASEATNEEFETLAAWQESLEAQLKENAEISTKNSVRRYLLEQLAANNSTELPEVSVNEEITAVLTQQMMEFSRMGIDVN 346          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_MICAN (Trigger factor OS=Microcystis aeruginosa (strain NIES-843) GN=tig PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.033e-19
Identity = 57/198 (28.79%), Postives = 107/198 (54.04%), Query Frame = 1
Query:    4 RRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQ-MQAGMKLNE 594
            + R + L +L  V DRG Q+GD+AIVD    + +  E    +IPD + +    D E G + + G ++ I G++  E K   L FPE + +E +      FT+  +EL  ++LP+LDD  A + +    TI +++ +L ++ +E  +    ++ D+A+  +L K   +D+P++L E++   +     +Q  Q G+ +N+
Sbjct:  149 KERQEQLATLVPVEDRGAQLGDVAIVDYRGKSAETGE----DIPDIDGEDLRVDMEAG-RFIEGMVEGIIGMKPEEVKEMTLTFPEDYPKEDVAAKAVIFTITMKELKAKELPELDDDFAQE-VSDQETIAELRASLEKRFQEQAEKETKESIDDALTKELVKGATLDLPETLIEKEVTHILTQSFMQFQQMGLDVNQ 340          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_CYAP8 (Trigger factor OS=Cyanothece sp. (strain PCC 8801) GN=tig PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18
Identity = 56/192 (29.17%), Postives = 105/192 (54.69%), Query Frame = 1
Query:    4 RRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDED--ESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQMQ 573
            + R +   +L  V DR  ++GD+AIVD       E+  E+  + IP  + + F  D  +G + + G ++ I G+Q  ET+   + FP  + +E L G  A F +  +EL  ++LP+LDD  A + +    TI +++E+L ++  E  Q A  ++  +A++ QL ++  +D+P +L E++  Q+     +QM+
Sbjct:  149 KERQEQQATLVPVEDRKAEMGDVAIVDYEGYFAPEEGEETERKPIPGVQGQDFRVDLTEG-RFIQGMVEGIVGMQPEETQEITVTFPSDYPREDLAGQVAIFKITVKELKAKELPELDDDFAEE-VSEFATIAELRESLEKQFTEEAQEATKKSIHDAMITQLLEICPVDLPNTLIEDEVTQVLTQTAMQME 338          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_PROMM (Trigger factor OS=Prochlorococcus marinus (strain MIT 9313) GN=tig PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.559e-18
Identity = 55/182 (30.22%), Postives = 100/182 (54.95%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQL 546
            + +  K L +L  V  R   +GDIA+V  S T  D+D S ++      +     D EDG +++PGF++ I G+  G+ K+    FP+ + +E  RG +A F +  +EL  R+LP LDD+ A +      T+E+++  L Q+ +E  +        +A+L+ L + +E+D+P +L +++ + L
Sbjct:  153 IEQSRKQLATLVPVESRPAAIGDIAVVSFSGT-YDDDGSAIEG---GSSDSMDVDLEDG-QMIPGFVEGIIGMNLGDEKTVDCHFPDDYSKEDARGRKASFVINLKELKTRELPDLDDAFA-QQSSDKATLEELRNDLEQRLQEDAKRRDRSNRHDALLEALTEQLEVDLPNTLVQQEIRNL 328          
The following BLAST results are available for this feature:
BLAST of EY666391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
TIG_TRIEI3.984e-2230.33Trigger factor OS=Trichodesmium erythraeum (strain... [more]
TIG_SYNP68.308e-2030.90Trigger factor OS=Synechococcus sp. (strain ATCC 2... [more]
TIG_SYNE78.308e-2030.90Trigger factor OS=Synechococcus elongatus (strain ... [more]
TIG_NOSP71.085e-1930.24Trigger factor OS=Nostoc punctiforme (strain ATCC ... [more]
TIG_ANAVT1.085e-1927.80Trigger factor OS=Anabaena variabilis (strain ATCC... [more]
TIG_ANASP2.417e-1927.32Trigger factor OS=Anabaena sp. (strain PCC 7120) G... [more]
TIG_SYNP24.123e-1930.00Trigger factor OS=Synechococcus sp. (strain ATCC 2... [more]
TIG_MICAN7.033e-1928.79Trigger factor OS=Microcystis aeruginosa (strain N... [more]
TIG_CYAP83.490e-1829.17Trigger factor OS=Cyanothece sp. (strain PCC 8801)... [more]
TIG_PROMM4.559e-1830.22Trigger factor OS=Prochlorococcus marinus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666391 ID=EY666391; Name=EY666391; organism=Citrus sinensis; type=EST; length=868bp
TTAAGACGTCGCCATAAGTCCCTTGGATCACTGAAAATTGTCACTGACAG
AGGACTACAGGTCGGTGACATTGCAATCGTTGATATATCAGCAACAACAA
TAGATGAAGATGAATCAAATGTTCAAAATATTCCAGATGCAGAGACCAAA
GGATTTCATTTTGATACAGAAGATGGGGACAAAGTTCTTCCAGGTTTTCT
TGATTCTATAAGTGGAATTCAACGAGGTGAAACAAAGTCCTTTCGACTCG
CATTCCCTGAATCCTGGAGACAAGAACATCTTCGTGGTGTTCAAGCTCAA
TTTACTGTTGAATGCAGAGAACTGTTTTATAGAGATTTGCCGAAATTGGA
TGACTCCCTTGCTGGAAAGCTTCTTCCCGGATGCACTACCATAGAGCAGG
TCAAGGAAACATTATTGCAGAAGTGTCGAGAAGTGGAGCAAACTGCAAAA
GACCAGGCGACTGATAATGCAATTCTAGACCAGCTTTACAAGATGGTGGA
AATTGATATTCCTCAATCCTTGTTTGAGGAACAAGGAAAGCAGCTTTATG
GGGCTCAACTTTTGCAGATGCAGGCAGGTATGAAATTGAACGAACAGCAG
TTGGCTGCTCTATCAAGCCCAAAAAGCAGTAAAAAAGTTTCTGGGAAAAC
CACAGGGAAAACATAACCCAATGGGAATAAACCGGAATCCTACCCGGCGG
GAAAATATCTTTAAACGGGAAAATTTTGCAGTTTTCCACTGGAAAAACTA
ATCGAAGAAAGTTAAAAACTCCTTTTGGTGAATTTTAAAACCACCAAAAC
GCAAAAATATGGGGGGGGATTTACTGATAAAAAAAAAGGGGCCAAAAACT
TCCCGCAAAGGGGGCTCT
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