CN184301

Overview
NameCN184301
Unique NameCN184301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184301 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.072e-13
Identity = 40/107 (37.38%), Postives = 65/107 (60.75%), Query Frame = -1
Query:  226 YVHVRDVALAHILLYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYDTVKSLQEKGHLPIPTQQQE 543
            YVH+ D+ L+HI LY+ P A GRY+C+       E+V++L + +PEY IPTK     +   +P  FS++KL+++G EF   ++      V + + KG +PIP ++ E
Sbjct:  228 YVHLDDLCLSHIYLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKG-IDDNLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIPIPAEKTE 333          
BLAST of CN184301 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.072e-13
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = -1
Query:  220 YVHVRDVALAHILLYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYDTVKSLQEKGHLPIP-----TQQQEES 543
            YVH+ D+ L+HI LYE P A GRY+C+       E+V++L + +PEY IPTK     +   +P  FS++KL+++G EF   ++      V + + KG +PIP     T+  EES
Sbjct:  228 YVHLDDLCLSHIYLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKG-IDDNLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIPIPIPAEKTEAAEES 340          
BLAST of CN184301 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 44/135 (32.59%), Postives = 75/135 (55.56%), Query Frame = -1
Query:  217 SIIHILKYLNGSAKTYANSVQA-YVHVRDVALAHILLYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS--DEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYDTVKSLQEKGHLPIPTQQQEESV 609
            S+I  L  +NG+   Y+   Q  YVH+ D+   HI LYE P A GRY+C++      ++  ++ + +PEY +PT+ +  DE+ P      FS++KL D+G +F   ++      + S +EKG LP  T + ++ +
Sbjct:  206 SLITALSLINGAESHYSIIKQGQYVHLDDLCECHIFLYENPEAKGRYICSKQDATIHQLARMIKQKWPEYHVPTQFAGIDEELP---TVSFSSKKLIDMGFKFKYDLEDMFKGAIDSCKEKGFLPYSTNEVKKGL 337          
BLAST of CN184301 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = -1
Query:  244 YVHVRDVALAHILLYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYDTVKSLQEKGHLPI 543
            +VH+ D+ ++HI LYE P A+GRY+ +       ++ ++L + +PEY +PTK  D K    +  +FS++KL DLG EF   +K      V+S + KG LP+
Sbjct:  244 FVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKEDMGQ-VQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLLPL 343          
BLAST of CN184301 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.979e-11
Identity = 45/128 (35.16%), Postives = 67/128 (52.34%), Query Frame = -1
Query:  238 SIIHILKYLNGSAKTYANSVQA-YVHVRDVALAHILLYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS--DEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYDTVKSLQEKGHLPIPT 609
            S++  L  + G+   Y+   Q  YVH+ D+   HI LYE P A GRY+C+       ++ +I+   +PEY IPTK    DE+ P      FS++KL D G EF   ++      + + +EKG LP  T
Sbjct:  206 SLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPGIDEELP---IVSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREKGLLPYST 330          
The following BLAST results are available for this feature:
BLAST of CN184301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DFRA_PYRCO1.072e-1337.38Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_MALDO1.072e-1338.60Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_CALCH5.320e-1332.59Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_DIACA2.640e-1237.62Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_GERHY4.979e-1135.16Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005E18_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005E18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184301 ID=CN184301; Name=CN184301; organism=Citrus sinensis; type=EST; length=612bp
TTCATTACATACTCATTGGGGGACAAAAATACATTAACATAATTATTATT
CAATCCCCTTAGAAAGTATGTTTTGATACAAAGACAAACAAAACAAATAC
AAAATTAGGAAACACTTTCTTGGTTTTTGCTTAGTTGCTACAATTTTCAT
ATGAACTTGTTGCTACCAAATTTGTGGCAGCTCGTGCGATCAATTCGATA
ACTAAGATTGAATTTTCACTGATTCTTCTTGTTGTTGTGTAGGGATTGGA
AGGTGACCCTTCTCCTGCAAGCTCTTTACGGTGTCGTATAGGCATTGCTT
CACTGGTGTAAACTCTAATCCAAGATCCTTGAGCTTTTGGTTTGAAAACT
TGTAGGGTTTTTTTCTGGGGTTCTTTTCATCCGAACATTTGGTGGGGATA
GGATATTCAGGGAAGAACTTAGCCAGAATCTCCACCACCTCGCCGCGGTG
GAGCACGCTTTCGGCGCAGAGGTAACGGCCAGAGGCAGATGGAGTCTCAT
AGAGAAGAATGTGGGCTAATGCCACATCCCTAACGTGCACATATGCCTGA
ACTGAATTAGCATAAGTCTTTGCCGAGCCATTTAAGTACTTAAGAATGTG
AATAATGCTAGC
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