EY666379

Overview
NameEY666379
Unique NameEY666379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_TREDE (Seryl-tRNA synthetase OS=Treponema denticola GN=serS PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.279e-28
Identity = 66/166 (39.76%), Postives = 97/166 (58.43%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR-KTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNE 780
            +D+K+I++N EAV             +  +ELY+K   +   +  L+++RN  +  MK KL P ERQKL+++GK +KE +  +E +L +    L +    IPNM HP+ PVG ED   +  K  G     +F  KDH QLG+ LD+ DF+A  +VSG KFY+LKNE
Sbjct:    2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQKLSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNMAHPEAPVGKEDSDNLEVKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNE 167          
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_BORDL (Seryl-tRNA synthetase OS=Borrelia duttonii (strain Ly) GN=serS PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.082e-27
Identity = 70/166 (42.17%), Postives = 97/166 (58.43%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSIIRKTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNE 780
            +D K+IRDN E V            L+L++   ++   +  ++  L   RN  AN MK  ++ S R  LIE+GK LK  ++ LEE L  LT  L  E + IPN++ PDVPVG  ED +++ K  GN    +F  KDH ++G  LD+FDF+   EVSG+KFYYLKNE
Sbjct:    2 LDLKFIRDNLELVRENIKNRGLKLELDLLISFDDERRKLITKIGELNALRNENANAMKDNIDDSSRHYLIEKGKALKAEIMDLEERLGYLTSRLLVEHKRIPNISAPDVPVGVSEDENVVLKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNE 167          
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_BORRA (Seryl-tRNA synthetase OS=Borrelia recurrentis (strain A1) GN=serS PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.150e-27
Identity = 70/166 (42.17%), Postives = 96/166 (57.83%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSIIRKTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNE 780
            +D K+IRDN E V            L+L++   ++   +  ++  L   RN  AN MK  +  S R  LIE+GK LK  ++ LEE L  LT  L  E + IPN++ PDVPVG  ED +++ K  GN    +F  KDH ++G  LD+FDF+   EVSG+KFYYLKNE
Sbjct:    2 LDLKFIRDNLELVRENIKNRGLKLELDLLISFDDERRKLITKIGELNALRNENANAMKDNIGDSSRHYLIEKGKALKAEIMDLEERLGYLTSRLLVEHKRIPNISAPDVPVGVSEDENVVLKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNE 167          
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_BORGA (Seryl-tRNA synthetase OS=Borrelia garinii GN=serS PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.257e-25
Identity = 65/167 (38.92%), Postives = 98/167 (58.68%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSIIRKTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNE 780
            +D K+IRDN + V            ++ ++ L +K   +  ++  L  +RN  ++KM+  L+   +  L+E GK LK+ L+ LEE+L K++ +   E + +PN+  PDVP+G   ED   I+K G  P   +F  KDH +LG+ LD+ DFD   EVSGSKFYYLKNE
Sbjct:    2 LDLKFIRDNLDLVKKSIKARGLVLDIDKLVYLDDKRKKIITQIGELNAKRNENSSKMRENLDNVFKSSLMETGKILKKQLIDLEEELKKISFDFDLENKRVPNILSPDVPIGNSEEDNFEIKKVGVVPK-FDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNE 167          
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_BORAP (Seryl-tRNA synthetase OS=Borrelia afzelii (strain PKo) GN=serS PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.577e-25
Identity = 65/167 (38.92%), Postives = 98/167 (58.68%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSIIRKTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNE 780
            +D K+IRDN + V            ++ ++ L +K   +  ++  L  +RN  ++KM+  L+   +  LIE GK LK+ L+ LEE+L +++ +   E + +PN+  PDVP+G   ED   I+K G  P   +F  KDH +LG+ LD+ DFD   EVSGSKFYYLKNE
Sbjct:    2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKIITKIGELNAKRNENSSKMRENLDKVLKISLIETGKILKKQLIDLEEELERVSFDFDLENKRVPNILSPDVPIGNSEEDNFEIKKVGIIPR-FDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNE 167          
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_BORBZ (Seryl-tRNA synthetase OS=Borrelia burgdorferi (strain ZS7) GN=serS PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.259e-24
Identity = 63/167 (37.72%), Postives = 98/167 (58.68%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSIIRKTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNE 780
            +D K+IRDN + V            ++ ++ L +K   +  ++  L  +RN  ++KM+  L+   +  LIE GK LK+ L+ LEE+L +++ +   E + +PN+  PDVP+G   ED   I++ G  P   +F  KDH +LG+ LD+ DFD   E+SGSKFYYLKNE
Sbjct:    2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITKIGELNAKRNENSSKMQENLDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEEDNFEIKRVGVVPQ-FDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNE 167          
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_BORBU (Seryl-tRNA synthetase OS=Borrelia burgdorferi GN=serS PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.259e-24
Identity = 63/167 (37.72%), Postives = 98/167 (58.68%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSIIRKTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNE 780
            +D K+IRDN + V            ++ ++ L +K   +  ++  L  +RN  ++KM+  L+   +  LIE GK LK+ L+ LEE+L +++ +   E + +PN+  PDVP+G   ED   I++ G  P   +F  KDH +LG+ LD+ DFD   E+SGSKFYYLKNE
Sbjct:    2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITKIGELNAKRNENSSKMQENLDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEEDNFEIKRVGVVPQ-FDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNE 167          
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_RUBXD (Seryl-tRNA synthetase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=serS PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.560e-24
Identity = 64/174 (36.78%), Postives = 101/174 (58.05%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS--IIRKTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNETGMVKKG 801
            +D ++IR+N EAV            ++LV+EL ++   + +E++ LR  +N +A  +  + +   R +LIEE + LK  +   EE+L  + + L +E   IPNMTHP+ PVG +D     IR+ G  P    F  KDH +LG+ L I DFDA A+ +GSKFY+L+ E  +++ G
Sbjct:    2 LDLRYIRENAEAVKKNCRDRGVEADVDLVVELADRRSALIRELEGLRARQNQLAKAVAKERDERSRGRLIEESRELKGLIPRREEELRGVEERLAEEQLKIPNMTHPEAPVGRDDSENVEIRRWGEAPE-FGFEPKDHVELGEALGIIDFDAGAKTTGSKFYFLRGEAVLLELG 174          
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_TREPS (Seryl-tRNA synthetase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=serS PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.028e-23
Identity = 58/166 (34.94%), Postives = 91/166 (54.82%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR-KTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNE 780
            +D+++IR+N +AV            ++ ++ LY++ + +  E+  L+  RN  A  MK  L+   R   +E G+ LK+ +   E  LV+++D+L    Q +PNMTH   P G  D   +  K  G P   +F  +DH +L + LDI DF+A  +VSG KFYYLK E
Sbjct:    2 LDYRFIRENVDAVKENVKVRNVHADVDAIVHLYDQRVKLLAELQELQRARNENAQTMKSSLDALARSACVETGRALKDRIAHSERLLVQISDQLLSATQALPNMTHMCTPHGRSDSDNLEIKRCGVPPCFSFSPRDHVELARLLDIVDFEAGKKVSGIKFYYLKRE 167          
BLAST of EY666379 vs. ExPASy Swiss-Prot
Match: SYS_TREPA (Seryl-tRNA synthetase OS=Treponema pallidum GN=serS PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.028e-23
Identity = 58/166 (34.94%), Postives = 91/166 (54.82%), Query Frame = 1
Query:  286 IDFKWIRDNKEAVXXXXXXXXXXXXLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR-KTGGNPSVVNFPVKDHFQLGKTLDIFDFDAVAEVSGSKFYYLKNE 780
            +D+++IR+N +AV            ++ ++ LY++ + +  E+  L+  RN  A  MK  L+   R   +E G+ LK+ +   E  LV+++D+L    Q +PNMTH   P G  D   +  K  G P   +F  +DH +L + LDI DF+A  +VSG KFYYLK E
Sbjct:    2 LDYRFIRENVDAVKENVKVRNVHADVDAIVHLYDQRVKLLAELQELQRARNENAQTMKSSLDALARSACVETGRALKDRIAHSERLLVQISDQLLSATQALPNMTHMCTPHGRSDSDNLEIKRCGVPPCFSFSPRDHVELARLLDIVDFEAGKKVSGIKFYYLKRE 167          
The following BLAST results are available for this feature:
BLAST of EY666379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
SYS_TREDE1.279e-2839.76Seryl-tRNA synthetase OS=Treponema denticola GN=se... [more]
SYS_BORDL1.082e-2742.17Seryl-tRNA synthetase OS=Borrelia duttonii (strain... [more]
SYS_BORRA3.150e-2742.17Seryl-tRNA synthetase OS=Borrelia recurrentis (str... [more]
SYS_BORGA2.257e-2538.92Seryl-tRNA synthetase OS=Borrelia garinii GN=serS ... [more]
SYS_BORAP8.577e-2538.92Seryl-tRNA synthetase OS=Borrelia afzelii (strain ... [more]
SYS_BORBZ3.259e-2437.72Seryl-tRNA synthetase OS=Borrelia burgdorferi (str... [more]
SYS_BORBU3.259e-2437.72Seryl-tRNA synthetase OS=Borrelia burgdorferi GN=s... [more]
SYS_RUBXD5.560e-2436.78Seryl-tRNA synthetase OS=Rubrobacter xylanophilus ... [more]
SYS_TREPS8.028e-2334.94Seryl-tRNA synthetase OS=Treponema pallidum subsp.... [more]
SYS_TREPA8.028e-2334.94Seryl-tRNA synthetase OS=Treponema pallidum GN=ser... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666379 ID=EY666379; Name=EY666379; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCGCGCGGATCCTTACACTGAAAGTGAGCCTGACCCATCC
CGTAGGGACTACAATGCAGACAGTGAAGCTCGCTGCAATTCCTGCCGCCT
TTTCTTCTTCATGCTTTATGTTCAGGCCAGTAACTAAAACGCTAGGTTTA
ATTTCCCGCCGTAATCATTCTCAAAAACCTCCATTTCGGCTTCTTGCTAG
AGCTTTCTCTGCACCCGCTCTACAAACAATCGACACCACAGATAACAAAG
GTGGTGTGGCTGTGAAGCCGCAGTGGAAGGCTGCAATTGATTTCAAGTGG
ATAAGGGACAACAAAGAAGCTGTTTCCGCCAATATAAGAAATAGGAATTC
CAATGCAAATTTGGAACTTGTGCTCGAGCTTTATGAGAAAATGTTGAATG
TTCAGAAGGAAGTTGATAGGCTTCGTGAGGAAAGAAATGCTGTTGCAAAC
AAGATGAAAGGGAAACTAGAACCATCTGAGCGTCAAAAACTCATAGAAGA
AGGAAAGAATTTGAAGGAAGGACTTGTGACTTTGGAAGAAGACCTGGTTA
AACTCACAGATGAGCTTCAGCAGGAAGCACAGTGCATACCGAATATGACT
CATCCGGATGTTCCCGTTGGAGGGGAGGATTGTTCTATAATTAGAAAAAC
GGGTGGTAACCCCAGTGTGGTTAACTTCCCTGTCAAGGATCACTTTCAGC
TTGGGAAAACACTCGATATCTTTGATTTTGATGCAGTTGCCGAGGTCAGT
GGTTCAAAATTCTATTACCTGAAGAATGAAACTGGTATGGTAAAAAAGGG
TCCTAATCAACTGGAACCTCCTAAAAATGAAAAAAAAGGGGAATTCAACC
CTCTAACCTAATCCCGGA
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