EY666378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27 Identity = 83/238 (34.87%), Postives = 125/238 (52.52%), Query Frame = 2 Query: 11 AVLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVGGDTLSWSSTSVFTPRKD------GEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQ-PDGQLPKCFRYGSEKWRNWAAVIIQQAWCRQRKKKFQTSL-----------------------LAVTPSRFAVTSLRPITAEATWRDP*STKK*REMTSLPEAMVDWN 634 A+L VPM ++MDEQ ++A+ V YT+ ++V+EG+PV+++ L ++ G L+ ++ T + G+FCGEEL++WA+D S S+ P STRTV A+ +V+AF+++A DLK +Q R+ QL FRY S++W+ WAA IQ AW R KKK + SL + SRFA LR I + R P ++ M A D+N Sbjct: 479 ALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEM-LFIMRGKLLTITTNGGRTGFLNSEYLGAGDFCGEELLTWALDPHSSSN--LPISTRTVRALMEVEAFALKADDLKFVASQFRRLHSKQLRHTFRYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENRLQDALAKEACGSSPSLGATIYASRFAANILRTIRRSGSVRKPRMPERMPPMLLQKPAEPDFN 713
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.169e-26 Identity = 71/184 (38.59%), Postives = 112/184 (60.87%), Query Frame = 2 Query: 11 AVLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVG--GDTLSWSSTSVFTPR---KDGEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQ-PDGQLPKCFRYGSEKWRNWAAVIIQQAWCRQ-RKKKFQTSLLAVTPSRFAVTSLR 541 A+++ VP+ + MDE+ ++AI YT+ +LV+EG+PVN++ I+ G + S F R K+G+FCGEEL++WA+D +S S+ P STRT +A+T+V+AF++ A +LK +Q R+ Q+ FR+ S++WR WAA+ IQ AW R +KKK + +VTS+R Sbjct: 506 ALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSN--LPSSTRTAKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRYVKKKKLEQLRKEEEEGEGSVTSIR 687
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.169e-26 Identity = 67/173 (38.73%), Postives = 106/173 (61.27%), Query Frame = 2 Query: 14 VLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVG--------GDTLSWSSTSVFTPRKDGEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQ-PDGQLPKCFRYGSEKWRNWAAVIIQQAWCRQRKKKFQTSLLA 505 +++ VP+ +MDE+ ++AI T+G FLV+EG+PVN++ I+ G G + ++ + P G+FCGEEL++WA+D + + P STRTV+A+ +V+AF+++A DL+ +Q R+ QL FR+ S +WR WAA IQ AW R RK+K++T L A Sbjct: 465 LVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCLIGP---GDFCGEELLTWALDPRP--VVILPSSTRTVKAICEVEAFALKAEDLQFVASQFRRLHTKQLRHKFRFYSHQWRTWAACFIQAAWRRHRKRKYKTELRA 632
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 7.578e-26 Identity = 67/168 (39.88%), Postives = 101/168 (60.12%), Query Frame = 2 Query: 14 VLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVG---GDTLSWSSTSVFTP--RKDGEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQ-PDGQLPKCFRYGSEKWRNWAAVIIQQAWCRQRKKKFQTSL 499 +LK+VP+ + MDEQ ++A+ V YT+ + ++EG+PV ++ ++ G T + T F K +FCGE+L++WA+D QS S FP STRTV+A+T+V+AF++ A DLK +Q R+ QL FR+ S +WR W A IQ AW R ++K SL Sbjct: 468 LLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVYLKPSDFCGEDLLTWALDPQSSSH--FPISTRTVQALTEVEAFALAADDLKLVASQFRRLHSKQLQHTFRFYSVQWRTWGASFIQAAWRRHCRRKLARSL 633
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.293e-25 Identity = 64/163 (39.26%), Postives = 104/163 (63.80%), Query Frame = 2 Query: 14 VLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVG--GDTLSWSSTSVFTPR---KDGEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQ-PDGQLPKCFRYGSEKWRNWAAVIIQQAWCRQRKKK 484 +++ VP+ MDE+ ++AI YT+ ++V+EG+PVN++ I+ G + S F R K+G+FCGEEL++WA+D ++ S+ P STRTV+A+T+V+AF++EA +LK +Q R+ Q+ + FR+ S++WR WAA IQ AW R ++K Sbjct: 502 LVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSN--LPSSTRTVKALTEVEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWAACFIQAAWRRHLRRK 662
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.688e-25 Identity = 66/168 (39.29%), Postives = 101/168 (60.12%), Query Frame = 2 Query: 14 VLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVG---GDTLSWSSTSVFTP--RKDGEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQPDGQ-LPKCFRYGSEKWRNWAAVIIQQAWCRQRKKKFQTSL 499 +++ VP+ +MD+Q ++AI TQG ++V+EG+PV ++ I+ G T + T F + G+FCGEEL++WA+ +S + P STRTV A+ +V+AF+++AGDLK NQ R+ + L FRY S +WR WAA +Q AW R ++KK SL Sbjct: 475 LVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTVN--LPSSTRTVRALEEVEAFALQAGDLKFVANQFRRLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSL 640
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.761e-25 Identity = 65/168 (38.69%), Postives = 101/168 (60.12%), Query Frame = 2 Query: 14 VLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVG---GDTLSWSSTSVFTP--RKDGEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQ-PDGQLPKCFRYGSEKWRNWAAVIIQQAWCRQRKKKFQTSL 499 +LK+VP+ + MDEQ ++A+ V YT+ ++++EG+PV ++ ++ G T + + F K +FCGE+L+ WA+D QS S FP STRTV+A+T+V+AF++ A DLK +Q R+ QL FR+ S +WR W+ IQ AW R ++K SL Sbjct: 467 LLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGEDLLPWALDPQSSSH--FPISTRTVQALTEVEAFALTAEDLKSVASQFRRLHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRRKLAKSL 632
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.912e-25 Identity = 62/163 (38.04%), Postives = 104/163 (63.80%), Query Frame = 2 Query: 14 VLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVG--GDTLSWSSTSVFTPR---KDGEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQ-PDGQLPKCFRYGSEKWRNWAAVIIQQAWCRQRKKK 484 +++ VP+ MDE+ ++AI +T+ ++V+EG+PVN++ I+ G + S F R K+G+FCGEEL++WA+D ++ S+ P STRTV+A+T+V+AF++EA +LK +Q R+ Q+ + FR+ S++WR WA+ IQ AW R ++K Sbjct: 496 LVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSN--LPSSTRTVKALTEVEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRK 656
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 8.379e-25 Identity = 64/164 (39.02%), Postives = 104/164 (63.41%), Query Frame = 2 Query: 11 AVLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVG--GDTLSWSSTSVFTPR---KDGEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQ-PDGQLPKCFRYGSEKWRNWAAVIIQQAWCRQRKKK 484 A+++ VP+ + MDE+ ++AI +T+ +LV+EG+PVN++ I+ G + S F R K+G+FCG+EL++WA+D +S S+ P STRTV+A+T+V+AF++ A +LK +Q R+ Q+ FR+ S++WR WAA +Q AW R K+K Sbjct: 507 ALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSN--LPSSTRTVKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFMQAAWRRYIKRK 668
BLAST of EY666378 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.093e-24 Identity = 63/164 (38.41%), Postives = 102/164 (62.20%), Query Frame = 2 Query: 11 AVLKEVPMLQRMDEQRMNAILYHFNLVPYTQGMFLVQEGNPVNKLQLIVVG--GDTLSWSSTSVFTPR---KDGEFCGEELVSWAVDQQSDSSTVFPRSTRTVEAVTQVDAFSIEAGDLKEFVNQCRQ-PDGQLPKCFRYGSEKWRNWAAVIIQQAWCRQRKKK 484 A+++ VP+ + MD++ ++AI +T+ +LV+EG+PV+++ I+ G + S F R K+GEFCGEEL++WA+D +S + P STRTV+A+T+V+AF++ + +LK +Q R+ Q+ FR+ S +WR WAA IQ AW R K+K Sbjct: 491 ALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVN--LPSSTRTVKALTEVEAFALTSEELKFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRK 652 The following BLAST results are available for this feature:
BLAST of EY666378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666378 ID=EY666378; Name=EY666378; organism=Citrus sinensis; type=EST; length=857bpback to top |