EY666377

Overview
NameEY666377
Unique NameEY666377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY666377 vs. ExPASy Swiss-Prot
Match: LFS_ALLCE (Lachrymatory-factor synthase OS=Allium cepa GN=LFS PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.645e-13
Identity = 49/151 (32.45%), Postives = 68/151 (45.03%), Query Frame = 1 
Query:  142 KWKGKESIESASITAEQVWACLEDFCNAHKWLPNLDTCYLVEGVPGQPGLVRYCASSKSDGHEVTIR-WVKEKLILMDPIQRWLSYEVTDNNLGIKSYVATIKVFPINFDNGMKGCRIEWSYVADPFEGWKFEDFASHIDYSLKFMTKKME 591
            KW GK      +   EQ W  L+DF N HK +P+L  C LVEG     G VRY    K   H +    W KEKL+ +D      SY  T+   G + Y AT+++         KG R +WS+     EG     F   + +    + +K+E
Sbjct:   20 KWSGKVHALLPNTKPEQAWTLLKDFINLHKVMPSLSVCELVEGEANVVGCVRYV---KGIMHPIEEEFWAKEKLVALDNKNMSYSYIFTECFTGYEDYTATMQIVE---GPEHKGSRFDWSFQCKYIEGMTESAFTEILQHWATEIGQKIE 164
The following BLAST results are available for this feature:
BLAST of EY666377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LFS_ALLCE6.645e-1332.45Lachrymatory-factor synthase OS=Allium cepa GN=LFS... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-C01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666377 ID=EY666377; Name=EY666377; organism=Citrus sinensis; type=EST; length=801bp
CTTGATTCAACCATCCCATAATGCCAAAGCTCCAGAGCTATTAGATATCT
TGATTAGATAGTGAAGTGATCCAGCAATTAGCAAAGCCAACTCCACTTCC
CTCTCAAGAGTCGAGTAGTCATGGCAGAAGAACAACTATCCAAATGGAAA
GGCAAGGAGAGTATTGAGAGTGCAAGCATAACGGCAGAACAGGTTTGGGC
TTGCCTTGAGGATTTTTGCAACGCACATAAGTGGCTGCCCAATCTTGATA
CATGTTACCTGGTTGAAGGAGTTCCCGGGCAGCCTGGTCTGGTTCGCTAC
TGCGCTAGCTCTAAATCTGATGGTCATGAGGTGACAATCAGATGGGTGAA
AGAGAAGCTGATTCTCATGGATCCAATACAACGGTGGCTTAGCTACGAGG
TCACTGATAATAATTTGGGAATTAAGTCGTATGTGGCGACCATCAAAGTA
TTTCCCATCAATTTTGACAATGGAATGAAAGGGTGCAGGATCGAGTGGTC
ATACGTTGCCGACCCATTTGAAGGGTGGAAATTTGAAGATTTTGCCTCTC
ATATCGATTATTCGCTAAAATTCATGACTAAAAAGATGGAACATGCTTCT
CTCCTGATGGGACAAAATTTGAGTACGAGTGCTACCTAGTTTTAAATTTT
TGCCATTGTTATTGCGCTTTAAAAATATGGAACTGGCAAGCTTATTTTAT
ACGTTAAATTGGACACACGGAACGTCCGGGCTACTTCCAATGGGTCCTCC
CCCAAAGAGAACATGCAGGAAGGGCCCACCTCGGGGGGGGCGCCCCGGGA
G
back to top