EY666361

Overview
NameEY666361
Unique NameEY666361
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_ARATH (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana GN=PSAL PE=1 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 1.827e-77
Identity = 140/192 (72.92%), Postives = 160/192 (83.33%), Query Frame = 2
Query:   41 MASVSSPMASQLKSSFTSP-VSRSLLTPRGISGSPFRVVPSKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTG 613
            MA+ +SPMASQL+SSF+S  +S+ L  P+GISG+PF V P+KR   F V+A++S+K T+QV+QPINGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRGVEVGLAHGF LVGPFVKAGPLRNT              VVILS+CLTIYGI+SF EGEPS AP LTLTGRKK+PDQLQTADGWAKFTG
Sbjct:    1 MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTG 192          

HSP 2 Score: 31.187 bits (69), Expect = 1.827e-77
Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  625 FGGISGGIWVYFLLYGLN 678
            FGGISG  W YFLLY L+
Sbjct:  196 FGGISGVTWAYFLLYVLD 213          
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_CUCSA (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus GN=PSAL PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.351e-75
Identity = 144/218 (66.06%), Postives = 169/218 (77.52%), Query Frame = 2
Query:   41 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTGRILLLVEFLGAFGFISCFMALTLP*LP 694
            MA+ +SP ASQL SSF S  +R+L++P+G+S SP R +P+ R+  F ++AIQ++KPT+QVIQPINGDPFIGSLETP+TSSPLIAWYLSNLPAYRTAVSPLLRG+EVGLAHGF LVGPFVKAGPLRNT              +VILS+CLT+YG+ASFNEGEPSTAP LTLTGRKK PD LQTADGWAKF+G       F G  G I  +  L +  LP
Sbjct:    1 MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFF----FGGISGVIWAYFLLYVLDLP 213          
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_SPIOL (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea GN=PSAL PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.433e-74
Identity = 147/216 (68.06%), Postives = 167/216 (77.31%), Query Frame = 2
Query:   41 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPS-KRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTGRILLLVEFLGAFGFI-SCFMALTL 682
            MA+ +SPMASQLKS FT+   ++L+ P+GISG   R  PS +R   F V+AI++EKPTYQVIQP+NGDPFIG LETP+TSSPLIAWYLSNLPAYRTAV+PLLRGVEVGLAHGFLLVGPFVKAGPLRNTE             VVILS+CLT+YGIASF EGEPS AP LTLTGRKK+PDQLQ+ADGWAKFTG       F G  G   +CF+   L
Sbjct:    1 MAATTSPMASQLKSGFTT---KALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFTGGFF----FGGVSGVTWACFLMYVL 209          
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_HORVU (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.293e-65
Identity = 130/212 (61.32%), Postives = 154/212 (72.64%), Query Frame = 2
Query:   59 PMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTGRILLLVEFLGAFGFISCFMALTLP*LP 694
            PMASQ+  S       +   PRG+SG+        R PRF+VKA++S+KPTYQV+QPINGDPFIGSLETP+TSSPL+AWYLSNLPAYRTAVSPLLRG+EVGLAHG+LLVGPF   GPLRNT +            V ILS+CLT+YG+ASFNEGEPSTAP LTLTGRKKE D+LQTA+GW++FTG       F G  G +  +  L +  LP
Sbjct:    8 PMASQVMKS-----GLACSKPRGMSGASLT-----RRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQFTGGFF----FGGVSGAVWAYFLLYVLDLP 205          
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_THEEB (Photosystem I reaction center subunit XI OS=Thermosynechococcus elongatus (strain BP-1) GN=psaL PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.816e-28
Identity = 62/156 (39.74%), Postives = 96/156 (61.54%), Query Frame = 2
Query:  215 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTGRILLLVEFLGAFGFISCFMALTL 682
            ++++P NGDPF+G L TPI+ S L+  ++ NLPAYR  +SP+LRG+EVG+AHG+ L+GP+VK GPLR++++            +++ + CL  YG+ SF +G  S+             D L+T++GW++FT        F+GA G  S F+A  L
Sbjct:    4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGF-----FVGAMG--SAFVAFFL 139          
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_GUITH (Photosystem I reaction center subunit XI OS=Guillardia theta GN=psaL PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.816e-28
Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = 2
Query:  215 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFT 610
            Q ++P N DPF+G+L TPIT+S      LSNLPAYR  +SPLLRG+E+G+ HG+ LVGPF K GPLRN+E+            ++I++ CL IYG+ SFN  +                +QLQ+A GW +FT
Sbjct:    3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPFYKLGPLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTNDGG--------------EQLQSAKGWRQFT 120          
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_SYNEN (Photosystem I reaction center subunit XI OS=Synechococcus elongatus naegeli GN=psaL PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.825e-27
Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = 2
Query:  215 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTGRILLLVEFLGAFGFISCFMALTL 682
            ++++P NGDPF+G L TPI+ S L+  ++ NLPAYR  +SP+L G+EVG+AHG+ L+GP+VK GPLR++++            +++ + CL  YG+ SF +G  S+             D L+T++GW++FT        F+GA G  S F+A  L
Sbjct:    4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGF-----FVGAMG--SAFVAFFL 139          
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_GRATL (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui GN=psaL PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.384e-27
Identity = 63/151 (41.72%), Postives = 89/151 (58.94%), Query Frame = 2
Query:  221 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTGRILLLVEFLGAFGFISCFMA 673
            IQ  N DPF+G+L TP+++S      L+NLPAYR  +SPLLRG+E+G+AHG+ LVGPF K GPLRNT++            ++IL++CL++YG  SF++ +                D LQT +GW +FT     LV  +G  GF    +A
Sbjct:    5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDDAK--------------DLLQTTEGWGQFTAG--FLVGAVGGSGFAYLLLA 139          
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_CYACA (Photosystem I reaction center subunit XI OS=Cyanidium caldarium GN=psaL PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.384e-27
Identity = 62/154 (40.26%), Postives = 88/154 (57.14%), Query Frame = 2
Query:  221 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTGRILLLVEFLGAFGFISCFMALTL 682
            I+P   +PF+G+L TP+ SS +  WYL NLP YR  +SPLLRG+E+G+AHG+ ++GPF K GPLRNT++            ++I SI + IYGI +F+  E +              D+LQTA+GW +     LL    +G  GF    +A  L
Sbjct:    5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYKLGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKLQTANGWRQLASGFLL--GAVGGAGFAYILLANNL 142          
BLAST of EY666361 vs. ExPASy Swiss-Prot
Match: PSAL_PORPU (Photosystem I reaction center subunit XI OS=Porphyra purpurea GN=psaL PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.066e-27
Identity = 63/153 (41.18%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  215 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTGRILLLVEFLGAFGFISCFMA 673
            + I+P N DPF+G+L TP+++S      L NLPAYR  +SPLLRG+E+G+AHG+ L+GPF K GPLR T++            ++IL+ CL++YG  SF               R    D LQTA+GW +FT     LV  +G  GF    +A
Sbjct:    3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKDPLQTAEGWGQFTAG--FLVGAVGGSGFAYLLLA 139          
The following BLAST results are available for this feature:
BLAST of EY666361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PSAL_ARATH1.827e-7772.92Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_CUCSA2.351e-7566.06Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_SPIOL4.433e-7468.06Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_HORVU1.293e-6561.32Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_THEEB2.816e-2839.74Photosystem I reaction center subunit XI OS=Thermo... [more]
PSAL_GUITH2.816e-2845.45Photosystem I reaction center subunit XI OS=Guilla... [more]
PSAL_SYNEN1.825e-2739.10Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_GRATL2.384e-2741.72Photosystem I reaction center subunit XI OS=Gracil... [more]
PSAL_CYACA2.384e-2740.26Photosystem I reaction center subunit XI OS=Cyanid... [more]
PSAL_PORPU4.066e-2741.18Photosystem I reaction center subunit XI OS=Porphy... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666361 ID=EY666361; Name=EY666361; organism=Citrus sinensis; type=EST; length=863bp
CTTGGTAGAAACAGAAGTCTTTTAACAAACACAATCTCAAATGGCTTCTG
TTTCTTCTCCAATGGCCAGCCAGCTCAAAAGTAGCTTTACTTCACCAGTT
TCCAGGAGCCTGCTTACTCCAAGGGGTATCTCTGGATCTCCATTCAGGGT
TGTTCCCTCCAAGAGAAGCCCTCGTTTCATTGTCAAAGCTATCCAATCTG
AAAAGCCAACTTACCAAGTTATTCAGCCAATCAATGGTGATCCATTCATT
GGAAGCTTGGAGACTCCAATTACATCAAGTCCATTGATTGCATGGTACCT
CTCAAATCTACCAGCTTATCGGACGGCAGTCAGCCCACTACTGAGAGGAG
TAGAGGTGGGGTTGGCCCATGGATTCCTCCTTGTGGGTCCATTTGTTAAG
GCAGGGCCATTGAGAAACACAGAAATAGCAGGACCAGCAGGGTCATTGGC
AGCTGGTGGCCTTGTTGTGATCCTCAGCATTTGCTTGACAATCTATGGAA
TTGCTTCATTCAATGAAGGAGAGCCATCCACTGCTCCAGGCTTAACATTG
ACCGGAAGGAAGAAGGAGCCTGATCAGTTGCAAACAGCTGATGGGTGGGC
TAAGTTCACTGGGAGGATTCTTCTTTTGGTGGAATTTCTGGGGGCATTTG
GGTTTATTTCCTGCTTTATGGCCTTAACCCTTCCTTAACTTCCTTAAAAA
AAAATAGGAACGGTCCACTTTTTTGGGTTAAAAAACCCCTGGGATCCCAA
TTTAACAACCCGGGAAAACCCACCCGGTTGGGCATTTTTCATTCCCAAGG
AAACTCTGCCTTCCGATTGTGGAAAAAAAAAAAAAAAAGACAAAAGGGGG
GGCCGCCCACAAA
back to top