EY666360

Overview
NameEY666360
Unique NameEY666360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: BUB3_MOUSE (Mitotic checkpoint protein BUB3 OS=Mus musculus GN=Bub3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.305e-33
Identity = 70/156 (44.87%), Postives = 100/156 (64.10%), Query Frame = 3
Query:  150 ELGNPPSDGISNLRFS-NHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGKTVWVVATCRK 614
            +L  PP DGIS+++FS N S  LLVSSWD SVRLYD  AN +R ++ H G VLDC F+D +  +S   DH ++    +  +E+++G HDAP+RC+EY      ++TGSWD+++K WDPR          GT+ QPE+VY+LS+ G  + V    R+
Sbjct:    8 KLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCN-----AGTFSQPEKVYTLSVSGDRLIVGTAGRR 158          
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: BUB3_HUMAN (Mitotic checkpoint protein BUB3 OS=Homo sapiens GN=BUB3 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.305e-33
Identity = 70/156 (44.87%), Postives = 100/156 (64.10%), Query Frame = 3
Query:  150 ELGNPPSDGISNLRFS-NHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGKTVWVVATCRK 614
            +L  PP DGIS+++FS N S  LLVSSWD SVRLYD  AN +R ++ H G VLDC F+D +  +S   DH ++    +  +E+++G HDAP+RC+EY      ++TGSWD+++K WDPR          GT+ QPE+VY+LS+ G  + V    R+
Sbjct:    8 KLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCN-----AGTFSQPEKVYTLSVSGDRLIVGTAGRR 158          
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: BUB3_BOVIN (Mitotic checkpoint protein BUB3 OS=Bos taurus GN=BUB3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.305e-33
Identity = 70/156 (44.87%), Postives = 100/156 (64.10%), Query Frame = 3
Query:  150 ELGNPPSDGISNLRFS-NHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGKTVWVVATCRK 614
            +L  PP DGIS+++FS N S  LLVSSWD SVRLYD  AN +R ++ H G VLDC F+D +  +S   DH ++    +  +E+++G HDAP+RC+EY      ++TGSWD+++K WDPR          GT+ QPE+VY+LS+ G  + V    R+
Sbjct:    8 KLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCN-----AGTFSQPEKVYTLSVSGDRLIVGTAGRR 158          
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: BUB3_PONAB (Mitotic checkpoint protein BUB3 OS=Pongo abelii GN=BUB3 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.797e-33
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 3
Query:  150 ELGNPPSDGISNLRFS-NHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGKTVWVVATCRK 614
            +L  PP DGIS+++FS N S  LLVSSWD SVRLYD  AN +R ++ H G VLDC F+D +  +S   DH ++    +  +E+++G HDAP+RC+EY      + TGSWD+++K WDPR          GT+ QPE+VY+LS+ G  + V    R+
Sbjct:    8 KLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMATGSWDQTVKLWDPRTPCN-----AGTFSQPEKVYTLSVSGDRLIVGTAGRR 158          
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: BUB3_DICDI (Mitotic checkpoint protein bub3 OS=Dictyostelium discoideum GN=bub3 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21
Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 3
Query:  132 PPTSGRELGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPR 503
            P +S  EL  PPSDGIS++ F  +S +LLV+SWD +VR YD   NV + ++ H GPV+D CF + +  FS     +V+      G E  +G H+  VR + Y+    Q+ TG WD+ LK WD R
Sbjct:    5 PTSSFYELRLPPSDGISSVNFCPNSVNLLVTSWDSTVRCYDTQNNVQKWQYNHKGPVMDGCFPEKNKVFSGDVFGSVKHYDPVAGVEKEVGSHEDGVRSVVYNSDTQQLFTGGWDQQLKLWDIR 128          
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: RAE1_SCHPO (Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe GN=rae1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.450e-18
Identity = 54/150 (36.00%), Postives = 79/150 (52.67%), Query Frame = 3
Query:  150 ELGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASA---NVLRGEFMHGGPVLDCCF-HDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQ---VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV 578
            E+  PP D IS+L FS  +++L  SSWD  VR+Y+  A   ++ +  + H GPVL   +  D +   S S D + +      G+   +  HD  VRC+ +  A G    + TGSWDK+LK WD R     + T + T   PERVY++  V
Sbjct:   24 EVAQPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQSIGKALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAVRCVRFVEAMGTSPILATGSWDKTLKYWDLR-----QSTPIATVSLPERVYAMDCV 168          
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: RAE1L_XENTR (mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.506e-17
Identity = 59/169 (34.91%), Postives = 87/169 (51.48%), Query Frame = 3
Query:  135 PTSGRELGNPPSDGISNLRFSNHS---DHLLVSSWDKSVRLYDASAN---VLRGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQ--VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGKTVWVVATCRK 614
            P    E+ +PP D IS L FS  +   + L+  SW   VR ++   N   + + + MH GPVLD C+ DD S  F+AS D T +    +  +   + +HDAP++ + +  A     ++TGSWDKSLK WD R  +      + T   PER Y   +V   + VVAT  +
Sbjct:   28 PMKDIEVTSPPDDSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQSIQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKSLKFWDTRSPNP-----LLTLQLPERCYCADVV-YPMAVVATAER 190          
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: RAEL1_PONAB (mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.227e-15
Identity = 60/177 (33.90%), Postives = 88/177 (49.72%), Query Frame = 3
Query:  111 SMTAVHPPPTSGRELGNPPSDGISNLRFSNHS---DHLLVSSWDKSVRLY---DASANVLRGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQ--VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGKTVWVVATCRK 614
            S T  +  P    E+ + P D I  L FS  +   + L+  SW   VR +   D+   + + + MH GPVLD C+ DD S  F+AS D T +    S  +   + +HDAPV+ I +  A     V+TGSWDK+LK WD R ++      +     PER Y   ++   + VVAT  +
Sbjct:   20 SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP-----MMVLQLPERCYCADVI-YPMAVVATAER 190          
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: RAE1L_HUMAN (mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.227e-15
Identity = 60/177 (33.90%), Postives = 88/177 (49.72%), Query Frame = 3
Query:  111 SMTAVHPPPTSGRELGNPPSDGISNLRFSNHS---DHLLVSSWDKSVRLY---DASANVLRGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQ--VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGKTVWVVATCRK 614
            S T  +  P    E+ + P D I  L FS  +   + L+  SW   VR +   D+   + + + MH GPVLD C+ DD S  F+AS D T +    S  +   + +HDAPV+ I +  A     V+TGSWDK+LK WD R ++      +     PER Y   ++   + VVAT  +
Sbjct:   20 SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP-----MMVLQLPERCYCADVI-YPMAVVATAER 190          
BLAST of EY666360 vs. ExPASy Swiss-Prot
Match: RAE1L_DANRE (mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.227e-15
Identity = 58/169 (34.32%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  135 PTSGRELGNPPSDGISNLRFSNHS---DHLLVSSWDKSVRLYDASAN---VLRGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQ--VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGKTVWVVATCRK 614
            P    E+ +PP D IS L FS  +   + L+  SW   VR ++   N   V + + MH GPVLD C+ DD S  F+AS D T +    +  +   + +H+ P+R I +  A     ++TGSWDK+LK WD R  +      + +   PER Y   +V   + VVAT  +
Sbjct:   28 PMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNP-----MMSLQMPERCYCADVV-YPMAVVATAER 190          
The following BLAST results are available for this feature:
BLAST of EY666360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
BUB3_MOUSE1.305e-3344.87Mitotic checkpoint protein BUB3 OS=Mus musculus GN... [more]
BUB3_HUMAN1.305e-3344.87Mitotic checkpoint protein BUB3 OS=Homo sapiens GN... [more]
BUB3_BOVIN1.305e-3344.87Mitotic checkpoint protein BUB3 OS=Bos taurus GN=B... [more]
BUB3_PONAB3.797e-3344.87Mitotic checkpoint protein BUB3 OS=Pongo abelii GN... [more]
BUB3_DICDI5.687e-2141.94Mitotic checkpoint protein bub3 OS=Dictyostelium d... [more]
RAE1_SCHPO3.450e-1836.00Poly(A)+ RNA export protein OS=Schizosaccharomyces... [more]
RAE1L_XENTR6.506e-1734.91mRNA export factor OS=Xenopus tropicalis GN=rae1 P... [more]
RAEL1_PONAB1.227e-1533.90mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV... [more]
RAE1L_HUMAN1.227e-1533.90mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV... [more]
RAE1L_DANRE1.227e-1534.32mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666360 ID=EY666360; Name=EY666360; organism=Citrus sinensis; type=EST; length=865bp
CTCGTTCAATTTTCAAACCTCCTTTCCCCCCTCAGCCCCTCTCTCTCGCT
TAAATCACTAACAGAACACGTCCCTAAACTCCTCTTCTCAATTCCCCCCC
AACCAATCACAGCATGACAGCTGTCCACCCGCCTCCTACCTCCGGTCGCG
AGCTCGGGAACCCTCCAAGCGACGGGATCTCGAACCTTCGATTCTCCAAC
CACAGCGATCACCTCCTCGTCTCCTCTTGGGATAAGAGCGTGAGATTGTA
CGATGCGAGCGCGAATGTGCTCCGAGGAGAGTTCATGCACGGTGGGCCCG
TGCTCGATTGCTGCTTCCACGACGATTCTTCCGGTTTCAGTGCCAGCGCC
GATCACACTGTTAGACGGCTAGTATTCAGCCATGGAAAAGAGGATATCCT
AGGGAAACATGATGCACCTGTGCGTTGTATTGAGTACTCGTATGCAGCAG
GGCAAGTGATTACTGGTAGTTGGGACAAATCTCTCAAGTGTTGGGATCCT
AGAGGAGCAAGTGGACAGGAGCGAACCCTTGTCGGAACGTACCCTCAGCC
TGAGCGTGTCTACTCCCTATCTCTTGTTGGGAAAACCGTCTGGGTGGTGG
CCACTTGCAGGAAGAAATGGAAATGTCTATGATTTAACAAAACATGTCTC
ACGCCCAAGCAAAGGAAAAAATCTTTTTTAAAAGAACTAAAACTAAATGG
GGGGGGTGGTAATCAAAAGGAAAACGAAAAAAGCTCTAAAGAACAAGTAA
AAAGAAAGGGCTCGAAAAAGGACAATATGGAACCCCGAAAAAACCAACGG
ATCCCACAAAAATATGAGCTTTCAGTGCCCCACCATAACCCCAACGGCCG
CCAAACGGACCATTG
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