EY666314

Overview
NameEY666314
Unique NameEY666314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY666314 vs. ExPASy Swiss-Prot
Match: TL225_ARATH (Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.034e-61
Identity = 134/199 (67.34%), Postives = 148/199 (74.37%), Query Frame = 3 
Query:  291 LADLNKYEAETRGEFGIGSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVINLAPKQAPWQDANGNNPIPGGSPKK--GQGVEKREGRGMVPLHPLCKGLTPEECLIERXPAARGSDLGAREALGLC 881
            +A+LN++EA+TRGEFGIGSAAQ+GSADL K VH  ENFRRANFTSADMRESDFSGS FNGAYLEKAVAYKANF+GADLSDTLMDRMVLNEANLTNAVLVR+VLTRSDLGGA IEGADFSDAVI+L  KQA  + A G NP+ G   +K  G G  +R   G  P  PL     P+  L        G D    E  GLC
Sbjct:   89 MAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGCGNSRRNAYGS-PSSPLLSA-PPQRLL--------GRDGFCDEKTGLC 277
The following BLAST results are available for this feature:
BLAST of EY666314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TL225_ARATH2.034e-6167.34Thylakoid lumenal protein At1g12250, chloroplastic... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-021-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666314 ID=EY666314; Name=EY666314; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGCACACTGTCATGGCGCTTTCTTCAATTTCCCCACTATCC
ATTAAATCTCTGAACTTCTGCTCTTCATCTTCAAAGGGTCCGTATCAGCT
GCATGCCCTGTCAAAGCCACTTTGGGTAGCCTGTCAAATAAGCTCCAAGA
CTGAGAGTGAAGGCCAATTTCCTGATTGTTCCAACAATCAGTGTGCAGGC
CCATATGCAAAACTAAAGAACTGGCGAGTTTTTGTGTCGACTGCATTAGC
AGCTGCGGTGGTTGCATCGTGCAGCTCTAACATCTCTGCTCTTGCTGATC
TTAATAAGTACGAGGCAGAAACTCGCGGGGAATTTGGCATAGGGTCAGCT
GCCCAATTCGGTTCTGCAGATCTCAGGAAAGCAGTACATGTGAAAGAAAA
TTTCAGAAGAGCAAATTTCACATCAGCCGATATGAGAGAATCTGATTTCA
GTGGTTCAAAATTCAATGGTGCATATCTTGAGAAAGCTGTTGCATATAAG
GCCAATTTTACAGGTGCGGATTTAAGTGACACATTAATGGATCGCATGGT
ACTTAACGAAGCTAATCTCACGAATGCTGTACTTGTTAGAACAGTACTAA
CTCGAAGTGATCTTGGAGGTGCCATTATTGAAGGTGCTGATTTTAGTGAT
GCTGTTATAAATCTTGCACCAAAGCAGGCTCCTTGGCAAGATGCCAATGG
GAACAATCCAATACCAGGAGGGAGCCCCAAAAAAGGCCAGGGTGTGGAAA
AACGCGAAGGAAGGGGGATGGTTCCCCTGCATCCCCTCTGTAAAGGGCTC
ACCCCGGAAGAGTGCTTGATCGAGAGGTNTCCTGCGGCACGCGGATCGGA
TTTGGGAGCGCGCGAAGCTTTAGGTCTATGTTGAAAGAGAGG
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